RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 DNAJC18Q9H819 358 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 CTNNA3Q9UI47 895 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 TRIM17Q9Y577 477 aa5.47□□□□□ -1.53
ATXN3-243ENST00000556671 COL2A1P02458 1487 aaPredicted RBP5.46□□□□□ -1.53
ATXN3-243ENST00000556671 RFX7Q2KHR2 1363 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 TCRBV16S1A1N1A0A5B0 115 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 SLC12A8A0AV02 714 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 TLR2O60603 784 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 MAFO75444 373 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-243ENST00000556671 NPTXRO95502 500 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 GSPT1P15170 499 aaKnown RBP5.46□□□□□ -1.54
ATXN3-243ENST00000556671 CHMLP26374 656 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 PSMC4P43686 418 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 MRE11P49959 708 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 USP14P54578 494 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 ICA1Q05084 483 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 IMMTQ16891 758 aaKnown RBP5.46□□□□□ -1.54
ATXN3-243ENST00000556671 USP39Q53GS9 565 aaKnown RBP5.46□□□□□ -1.54
ATXN3-243ENST00000556671 GRAMD4Q6IC98 578 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 ABHD17CQ6PCB6 329 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 BRAPQ7Z569 592 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 CTU1Q7Z7A3 348 aaKnown RBP5.46□□□□□ -1.54
ATXN3-243ENST00000556671 HIPK4Q8NE63 616 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 THAP3Q8WTV1 239 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-243ENST00000556671 PARK7Q99497 189 aaKnown RBP5.46□□□□□ -1.54
ATXN3-243ENST00000556671 RPAP3Q9H6T3 665 aaPredicted RBP5.46□□□□□ -1.54
ATXN3-243ENST00000556671 SH2D4AQ9H788 454 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 KANSL2Q9H9L4 492 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 STX8Q9UNK0 236 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 AGTPBP1Q9UPW5 1226 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 HS3ST3A1Q9Y663 406 aa5.46□□□□□ -1.54
ATXN3-243ENST00000556671 RLFQ13129 1914 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 A0A1W2PRG0 241 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 GOLGA6L22H0YM25 854 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 SUV39H1O43463 412 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 NMT2O60551 498 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 FLOT1O75955 427 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 HOXD10P28358 340 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 GUCY1A2P33402 732 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 MEOX1P50221 254 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 PTH1RQ03431 593 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 HGFACQ04756 655 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 GABPAQ06546 454 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 TRDNQ13061 729 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 ALX1Q15699 326 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 NRN1LQ496H8 165 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 CATSPEREQ5SY80 951 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 FGD2Q7Z6J4 655 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 RAET1EQ8TD07 263 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 EXTL1Q92935 676 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 COA7Q96BR5 231 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 NUP88Q99567 741 aaPredicted RBP5.45□□□□□ -1.54
ATXN3-243ENST00000556671 ARHGAP39Q9C0H5 1083 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 TRIM39Q9HCM9 518 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 HOXC10Q9NYD6 342 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 PCNTO95613 3336 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 KAT6AQ92794 2004 aa5.45□□□□□ -1.54
ATXN3-243ENST00000556671 KIAA1217Q5T5P2 1943 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 GREB1LQ9C091 1923 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-243ENST00000556671 PMS2P1A4D2B8 440 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 B4E1Z4 1266 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 F5H6K3 240 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 TNPO2O14787 897 aaKnown RBP5.44□□□□□ -1.54
ATXN3-243ENST00000556671 HIP1RO75146 1068 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 TTLL1O95922 423 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 MCCP23508 829 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 GCLCP48506 637 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-243ENST00000556671 KLRC3Q07444 240 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 FOXL1Q12952 345 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 KLF10Q13118 480 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 COG2Q14746 738 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 TMEM132BQ14DG7 1078 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 CCDC96Q2M329 555 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 TMEM177Q53S58 311 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 C2orf27AQ580R0 203 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 FAM83BQ5T0W9 1011 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 AKNAD1Q5T1N1 836 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 C17orf99Q6UX52 265 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 CATSPERGQ6ZRH7 1159 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 CHST3Q7LGC8 479 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 OTOP1Q7RTM1 612 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 CPXCR1Q8N123 301 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 BCL6BQ8N143 479 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-243ENST00000556671 IGSF22Q8N9C0 903 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 GPRC5AQ8NFJ5 357 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 CALML6Q8TD86 181 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 CEP95Q96GE4 821 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 ABHD8Q96I13 439 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 NELFAQ9H3P2 528 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 RNF41Q9H4P4 317 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-243ENST00000556671 NCOA5Q9HCD5 579 aaKnown RBP5.44□□□□□ -1.54
ATXN3-243ENST00000556671 VAT1LQ9HCJ6 419 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 ZCCHC17Q9NP64 241 aaKnown RBP5.44□□□□□ -1.54
ATXN3-243ENST00000556671 PLA2G3Q9NZ20 509 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 NAP1L2Q9ULW6 460 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-243ENST00000556671 TMX2Q9Y320 296 aa5.44□□□□□ -1.54
ATXN3-243ENST00000556671 ERICH2A1L162 156 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 TMEM232C9JQI7 657 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 NPIPB8E9PQR5 432 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 DHX16O60231 1041 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms