RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 C2CD2Q9Y426 696 aa8.32□□□□□ -1.08
HNRNPC-226ENST00000556628 STYXL1Q9Y6J8 313 aa8.32□□□□□ -1.08
HNRNPC-226ENST00000556628 DOCK6Q96HP0 2047 aa8.32□□□□□ -1.08
HNRNPC-226ENST00000556628 TISP43B9A030 160 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 PI15O43692 258 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 CUTAO60888 179 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 PPP6R2O75170 966 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 ECI2O75521 394 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 MICAL2O94851 1124 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 OAZ2O95190 189 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 YEATS4O95619 227 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 NFICP08651 508 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 MYL4P12829 197 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 GARTP22102 1010 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 AARSP49588 968 aaKnown RBP eCLIP8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 EPHB3P54753 998 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 LILRA4P59901 499 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 GPC5P78333 572 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 PRKCQQ04759 706 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 GPR17Q13304 367 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 MYBPC2Q14324 1141 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 SV2CQ496J9 727 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 FOXD4L5Q5VV16 416 aaPredicted RBP8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 C9orf57Q5W0N0 161 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 CCDC105Q8IYK2 499 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 DTWD2Q8NBA8 298 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 CACTINQ8WUQ7 758 aaKnown RBP8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 FOXD4L4Q8WXT5 416 aaPredicted RBP8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 ZNF560Q96MR9 790 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 PGLYRP2Q96PD5 576 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 KXD1Q9BQD3 176 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 PYM1Q9BRP8 204 aaKnown RBP8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 FAM213AQ9BRX8 229 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 GPR88Q9GZN0 384 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 TNMDQ9H2S6 317 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 CUEDC2Q9H467 287 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 ZFP14Q9HCL3 533 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 DPP3Q9NY33 737 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 TFIP11Q9UBB9 837 aaKnown RBP8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 NXF1Q9UBU9 619 aaKnown RBP8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 SIT1Q9Y3P8 196 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 YIPF1Q9Y548 306 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 WASF2Q9Y6W5 498 aa8.31□□□□□ -1.08
HNRNPC-226ENST00000556628 NOTCH4Q99466 2003 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 MUC6Q6W4X9 2439 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 ANO9A1A5B4 782 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 PIRO00625 290 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 CYB561D2O14569 222 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 PPEF2O14830 753 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 KIAA0391O15091 583 aaKnown RBP8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 NCAM2O15394 837 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 SIAH2O43255 324 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 FGF19O95750 216 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 OR4Q2P0C623 313 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 TMEM191BP0C7N4 346 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 CEBPBP17676 345 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 PNPLA4P41247 253 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 TUFMP49411 452 aaKnown RBP8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 STARD6P59095 220 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 TFAMQ00059 246 aaKnown RBP8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 SMARCB1Q12824 385 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 DUSP4Q13115 394 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 SNW1Q13573 536 aaKnown RBP8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 VEPH1Q14D04 833 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 ANGPT1Q15389 498 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 NR6A1Q15406 480 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 MLF2Q15773 248 aaPredicted RBP8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 TAF12Q16514 161 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 SLC5A9Q2M3M2 681 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 SLC44A4Q53GD3 710 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 ITIH5Q86UX2 942 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 IQUBQ8NA54 791 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 PJA1Q8NG27 643 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 FAM200AQ8TCP9 573 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 KCNG4Q8TDN1 519 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 ELSPBP1Q96BH3 223 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 SAAL1Q96ER3 474 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 RPP25Q9BUL9 199 aaKnown RBP8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 PCIF1Q9H4Z3 704 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 SLITRK6Q9H5Y7 841 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 BRD9Q9H8M2 597 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 MAGEF1Q9HAY2 307 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 FAM13BQ9NYF5 915 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 RBAKQ9NYW8 714 aaPredicted RBP8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 CFAP45Q9UL16 551 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 ASB3Q9Y575 518 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 MIA3Q5JRA6 1907 aa8.3□□□□□ -1.08
HNRNPC-226ENST00000556628 TSC2P49815 1807 aa8.29□□□□□ -1.08
HNRNPC-226ENST00000556628 KANSL1LA0AUZ9 987 aa8.29□□□□□ -1.08
HNRNPC-226ENST00000556628 FRMD3A2A2Y4 597 aa8.29□□□□□ -1.08
HNRNPC-226ENST00000556628 MTMR11A4FU01 709 aa8.29□□□□□ -1.08
HNRNPC-226ENST00000556628 KPNA7A9QM74 516 aa8.29□□□□□ -1.08
HNRNPC-226ENST00000556628 CAPN5O15484 640 aaPredicted RBP8.29□□□□□ -1.08
HNRNPC-226ENST00000556628 EXTL3O43909 919 aa8.29□□□□□ -1.08
HNRNPC-226ENST00000556628 HUS1O60921 280 aa8.29□□□□□ -1.08
HNRNPC-226ENST00000556628 PRPF6O94906 941 aaKnown RBP8.29□□□□□ -1.08
HNRNPC-226ENST00000556628 F13A1P00488 732 aa8.29□□□□□ -1.08
HNRNPC-226ENST00000556628 CYP11A1P05108 521 aa8.29□□□□□ -1.08
HNRNPC-226ENST00000556628 DCNP07585 359 aaKnown RBP8.29□□□□□ -1.08
HNRNPC-226ENST00000556628 ZSCAN22P10073 491 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms