RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 ZNF334Q9HCZ1 680 aaPredicted RBP11.39□□□□□ -0.59
SPTLC2-205ENST00000556607 FAM13BQ9NYF5 915 aa11.39□□□□□ -0.59
SPTLC2-205ENST00000556607 MAGED2Q9UNF1 606 aaPredicted RBP11.39□□□□□ -0.59
SPTLC2-205ENST00000556607 PCDHB5Q9Y5E4 795 aa11.39□□□□□ -0.59
SPTLC2-205ENST00000556607 SNX9Q9Y5X1 595 aa11.39□□□□□ -0.59
SPTLC2-205ENST00000556607 MORC2Q9Y6X9 1032 aaPredicted RBP11.39□□□□□ -0.59
SPTLC2-205ENST00000556607 KIF26AQ9ULI4 1882 aaPredicted RBP11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 FRMD3A2A2Y4 597 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 ZNF233A6NK53 670 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 POLR2DO15514 142 aaKnown RBP11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 PRPF40AO75400 957 aaKnown RBP11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 CLSTN1O94985 981 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 F13A1P00488 732 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 LMNAP02545 664 aaKnown RBP11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 ZSCAN22P10073 491 aaPredicted RBP11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 HAPLN1P10915 354 aaPredicted RBP11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 ACAT1P24752 427 aaKnown RBP11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 CCNE1P24864 410 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 CDC25CP30307 473 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 MAGEA9P43362 315 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 RBP5P82980 135 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 MYL7Q01449 175 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 GAREM2Q75VX8 874 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 LRRTM3Q86VH5 581 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 NELFCDQ8IXH7 590 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 C1orf127Q8N9H9 656 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 GLIS3Q8NEA6 775 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 TTC8Q8TAM2 541 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 FAM84AQ96KN4 292 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 LRRC3Q9BY71 257 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 TRIM9Q9C026 710 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 MTMR12Q9C0I1 747 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 SEMA4AQ9H3S1 761 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 DDX43Q9NXZ2 648 aaKnown RBP11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 HSFX1Q9UBD0 423 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 ITGA11Q9UKX5 1188 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 PIAS3Q9Y6X2 628 aa11.38□□□□□ -0.59
SPTLC2-205ENST00000556607 KIAA0391O15091 583 aaKnown RBP11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 CLIC2O15247 247 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 KINO60870 393 aaKnown RBP11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 PDIA4P13667 645 aaKnown RBP11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 ATF6P18850 670 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 AFMP43652 599 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 MYO1EQ12965 1108 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 SURF1Q15526 300 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 SHC4Q6S5L8 630 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 CEP57L1Q8IYX8 460 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 PDCL2Q8N4E4 241 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 LRRC52Q8N7C0 313 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 TTC16Q8NEE8 873 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 ATRIPQ8WXE1 791 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 BORCS6Q96GS4 357 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 FNBP1Q96RU3 617 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 BLZF1Q9H2G9 400 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 LMAN1LQ9HAT1 526 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 TRPV4Q9HBA0 871 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 KBTBD4Q9NVX7 518 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 CFAP45Q9UL16 551 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 L1RE1Q9UN81 338 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 DENND4CQ5VZ89 1909 aa11.37□□□□□ -0.59
SPTLC2-205ENST00000556607 COL4A2P08572 1712 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 SLC38A8A6NNN8 435 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 CHADO15335 359 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 EIF3DO15371 548 aaKnown RBP eCLIP11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 DLATP10515 647 aaKnown RBP11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 TNNI1P19237 187 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 CASP1P29466 404 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 AVPR1AP37288 418 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 LHX1P48742 406 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 GPR15P49685 360 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 CYP2J2P51589 502 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 E2F4Q16254 413 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 NFE2Q16621 373 aaPredicted RBP11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 DUOXA2Q1HG44 320 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 FAM26FQ5R3K3 315 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 SDHAF4Q5VUM1 108 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 TSSK4Q6SA08 328 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 CBWD2Q8IUF1 395 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 SPATA2LQ8IUW3 424 aaPredicted RBP11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 SCN4BQ8IWT1 228 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 ADGRF2Q8IZF7 708 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 TMEM86AQ8N2M4 240 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 MAB21L3Q8N8X9 362 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 STKLD1Q8NE28 680 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 BPIFB1Q8TDL5 484 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 ZFYVE19Q96K21 471 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 MMS19Q96T76 1030 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 ACBD6Q9BR61 282 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 TASP1Q9H6P5 420 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 KIAA1586Q9HCI6 787 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 SLC39A2Q9NP94 309 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 TMLHEQ9NVH6 421 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 THG1LQ9NWX6 298 aaKnown RBP11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 HSPBP1Q9NZL4 362 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 GTF3C4Q9UKN8 822 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 FBXO4Q9UKT5 387 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 PCDHA7Q9UN72 937 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 OBSL1O75147 1896 aa11.36□□□□□ -0.59
SPTLC2-205ENST00000556607 NCANO14594 1321 aa11.35□□□□□ -0.59
SPTLC2-205ENST00000556607 CSH1P0DML2 217 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms