RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 FBXO43Q4G163 708 aa15.12■□□□□ 0.01
ACTN1-219ENST00000556432 USP39Q53GS9 565 aaKnown RBP15.12■□□□□ 0.01
ACTN1-219ENST00000556432 NAIF1Q69YI7 327 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-219ENST00000556432 SYT13Q7L8C5 426 aa15.12■□□□□ 0.01
ACTN1-219ENST00000556432 TSTD1Q8NFU3 115 aa15.12■□□□□ 0.01
ACTN1-219ENST00000556432 CHFRQ96EP1 664 aa15.12■□□□□ 0.01
ACTN1-219ENST00000556432 BICD1Q96G01 975 aa15.12■□□□□ 0.01
ACTN1-219ENST00000556432 FAM83CQ9BQN1 747 aa15.12■□□□□ 0.01
ACTN1-219ENST00000556432 LRWD1Q9UFC0 647 aa15.12■□□□□ 0.01
ACTN1-219ENST00000556432 CCL26Q9Y258 94 aa15.12■□□□□ 0.01
ACTN1-219ENST00000556432 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-219ENST00000556432 DSPP15924 2871 aaKnown RBP15.12■□□□□ 0.01
ACTN1-219ENST00000556432 PATE3B3GLJ2 98 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 EPB41L2O43491 1005 aaKnown RBP15.11■□□□□ 0.01
ACTN1-219ENST00000556432 HYAL3O43820 417 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-219ENST00000556432 CLTAP09496 248 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 NMT1P30419 496 aaKnown RBP15.11■□□□□ 0.01
ACTN1-219ENST00000556432 DHPSP49366 369 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-219ENST00000556432 AARSP49588 968 aaKnown RBP eCLIP15.11■□□□□ 0.01
ACTN1-219ENST00000556432 GUCY1B3Q02153 619 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 ANKRD1Q15327 319 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 C11orf74Q86VG3 221 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 TTC30AQ86WT1 665 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 DAW1Q8N136 415 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 CPA6Q8N4T0 437 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 SNX29Q8TEQ0 813 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 USP13Q92995 863 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-219ENST00000556432 RUSC1Q9BVN2 902 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 TPSD1Q9BZJ3 242 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 PLEKHA5Q9HAU0 1116 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 IL21Q9HBE4 155 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 FBRSL1Q9HCM7 1045 aaKnown RBP15.11■□□□□ 0.01
ACTN1-219ENST00000556432 EBF1Q9UH73 591 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 ZMYM5Q9UJ78 669 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 CIZ1Q9ULV3 898 aaPredicted RBP15.11■□□□□ 0.01
ACTN1-219ENST00000556432 DNM3Q9UQ16 869 aa15.11■□□□□ 0.01
ACTN1-219ENST00000556432 SFI1A8K8P3 1242 aa15.1■□□□□ 0.01
ACTN1-219ENST00000556432 JAK2O60674 1132 aa15.1■□□□□ 0.01
ACTN1-219ENST00000556432 ATF6P18850 670 aa15.1■□□□□ 0.01
ACTN1-219ENST00000556432 MAPK8P45983 427 aa15.1■□□□□ 0.01
ACTN1-219ENST00000556432 RAD51AP2Q09MP3 1159 aa15.1■□□□□ 0.01
ACTN1-219ENST00000556432 PDGFRLQ15198 375 aa15.1■□□□□ 0.01
ACTN1-219ENST00000556432 PMS2CLQ68D20 193 aa15.1■□□□□ 0.01
ACTN1-219ENST00000556432 OR10T2Q8NGX3 314 aa15.1■□□□□ 0.01
ACTN1-219ENST00000556432 PIGKQ92643 395 aa15.1■□□□□ 0.01
ACTN1-219ENST00000556432 FAM212AQ96EL1 285 aa15.1■□□□□ 0.01
ACTN1-219ENST00000556432 SENP8Q96LD8 212 aa15.1■□□□□ 0.01
ACTN1-219ENST00000556432 SLC32A1Q9H598 525 aa15.1■□□□□ 0.01
ACTN1-219ENST00000556432 KIF9Q9HAQ2 790 aa15.1■□□□□ 0.01
ACTN1-219ENST00000556432 TDP1Q9NUW8 608 aa15.1■□□□□ 0.01
ACTN1-219ENST00000556432 ABI2Q9NYB9 513 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-219ENST00000556432 HSFX1Q9UBD0 423 aa15.1■□□□□ 0.01
ACTN1-219ENST00000556432 TTC26A0AVF1 554 aa15.09■□□□□ 0.01
ACTN1-219ENST00000556432 E9PMD0 336 aa15.09■□□□□ 0.01
ACTN1-219ENST00000556432 CDX4O14627 284 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-219ENST00000556432 PPEF2O14830 753 aa15.09■□□□□ 0.01
ACTN1-219ENST00000556432 CYP3A5P20815 502 aa15.09■□□□□ 0.01
ACTN1-219ENST00000556432 SMTNP53814 917 aa15.09■□□□□ 0.01
ACTN1-219ENST00000556432 IRX4P78413 519 aa15.09■□□□□ 0.01
ACTN1-219ENST00000556432 MCL1Q07820 350 aa15.09■□□□□ 0.01
ACTN1-219ENST00000556432 GNL2Q13823 731 aaKnown RBP15.09■□□□□ 0.01
ACTN1-219ENST00000556432 TTC38Q5R3I4 469 aa15.09■□□□□ 0.01
ACTN1-219ENST00000556432 TXNDC8Q6A555 127 aa15.09■□□□□ 0.01
ACTN1-219ENST00000556432 ANO7Q6IWH7 933 aa15.09■□□□□ 0.01
ACTN1-219ENST00000556432 NSUN7Q8NE18 718 aaKnown RBP15.09■□□□□ 0.01
ACTN1-219ENST00000556432 MRPS31Q92665 395 aaKnown RBP15.09■□□□□ 0.01
ACTN1-219ENST00000556432 CD101Q93033 1021 aa15.09■□□□□ 0.01
ACTN1-219ENST00000556432 GTF3C6Q969F1 213 aa15.09■□□□□ 0.01
ACTN1-219ENST00000556432 C17orf75Q9HAS0 396 aa15.09■□□□□ 0.01
ACTN1-219ENST00000556432 MAGED2Q9UNF1 606 aaPredicted RBP15.09■□□□□ 0.01
ACTN1-219ENST00000556432 NUP205Q92621 2012 aa15.09■□□□□ 0.01
ACTN1-219ENST00000556432 ABCA7Q8IZY2 2146 aa15.08■□□□□ 0.01
ACTN1-219ENST00000556432 LACTBL1A8MY62 500 aa15.08■□□□□ 0
ACTN1-219ENST00000556432 BCKDHBP21953 392 aa15.08■□□□□ 0
ACTN1-219ENST00000556432 DDX6P26196 483 aaKnown RBP eCLIP15.08■□□□□ 0
ACTN1-219ENST00000556432 GJA4P35212 333 aa15.08■□□□□ 0
ACTN1-219ENST00000556432 TNFSF9P41273 254 aa15.08■□□□□ 0
ACTN1-219ENST00000556432 SEC13P55735 322 aa15.08■□□□□ 0
ACTN1-219ENST00000556432 NLRP12P59046 1061 aa15.08■□□□□ 0
ACTN1-219ENST00000556432 LILRA4P59901 499 aa15.08■□□□□ 0
ACTN1-219ENST00000556432 MAPK7Q13164 816 aa15.08■□□□□ 0
ACTN1-219ENST00000556432 ORC2Q13416 577 aaPredicted RBP15.08■□□□□ 0
ACTN1-219ENST00000556432 ZRSR1Q15695 479 aaKnown RBP15.08■□□□□ 0
ACTN1-219ENST00000556432 ZPBP2Q6X784 338 aa15.08■□□□□ 0
ACTN1-219ENST00000556432 METTL23Q86XA0 190 aa15.08■□□□□ 0
ACTN1-219ENST00000556432 NUSAP1Q9BXS6 441 aaKnown RBP15.08■□□□□ 0
ACTN1-219ENST00000556432 RAB34Q9BZG1 259 aa15.08■□□□□ 0
ACTN1-219ENST00000556432 RPF1Q9H9Y2 349 aaKnown RBP15.08■□□□□ 0
ACTN1-219ENST00000556432 TRPC7Q9HCX4 862 aa15.08■□□□□ 0
ACTN1-219ENST00000556432 DUS2Q9NX74 493 aaKnown RBP15.08■□□□□ 0
ACTN1-219ENST00000556432 KLK13Q9UKR3 277 aa15.08■□□□□ 0
ACTN1-219ENST00000556432 NEUROG3Q9Y4Z2 214 aa15.08■□□□□ 0
ACTN1-219ENST00000556432 SPAARA0A1B0GVQ0 90 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 MAPTP10636 758 aaKnown RBP15.07■□□□□ 0
ACTN1-219ENST00000556432 IFNAR2P48551 515 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 FXR2P51116 673 aaKnown RBP eCLIP15.07■□□□□ 01e-6■■■■□ 19.9
ACTN1-219ENST00000556432 SIM1P81133 766 aaPredicted RBP15.07■□□□□ 0
ACTN1-219ENST00000556432 LMAN2Q12907 356 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 MTF1Q14872 753 aa15.07■□□□□ 0
ACTN1-219ENST00000556432 ZBTB6Q15916 424 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms