RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 TMEM35BQ8NCS4 154 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 C3orf58Q8NDZ4 430 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 ZNF606Q8WXB4 792 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 RABGGTAQ92696 567 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 TRIM11Q96F44 468 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 IGSF21Q96ID5 467 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 TTPALQ9BTX7 342 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 PLVAPQ9BX97 442 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 TSGA10Q9BZW7 698 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 ZNF518BQ9C0D4 1074 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 RC3H2Q9HBD1 1191 aaKnown RBP9.8□□□□□ -0.84
ACTN1-218ENST00000556343 CXXC1Q9P0U4 656 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-218ENST00000556343 PCDHGC3Q9UN70 934 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 ZKSCAN5Q9Y2L8 839 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 MRPL42Q9Y6G3 142 aaKnown RBP9.8□□□□□ -0.84
ACTN1-218ENST00000556343 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.8□□□□□ -0.84
ACTN1-218ENST00000556343 SCN5AQ14524 2016 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 NT5C1B-RDH14C9J2C7 533 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 LPXNO60711 386 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 OAZ2O95190 189 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 RB1P06400 928 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 PLEKP08567 350 aaPredicted RBP9.79□□□□□ -0.84
ACTN1-218ENST00000556343 PNMA6AP0CW24 399 aaPredicted RBP9.79□□□□□ -0.84
ACTN1-218ENST00000556343 FGFR3P22607 806 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 MAGEA1P43355 309 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 NSFP46459 744 aaKnown RBP9.79□□□□□ -0.84
ACTN1-218ENST00000556343 CREMQ03060 361 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 KIF5AQ12840 1032 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 RAB30Q15771 203 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 NFE2Q16621 373 aaPredicted RBP9.79□□□□□ -0.84
ACTN1-218ENST00000556343 CTXN3Q4LDR2 81 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 RASIP1Q5U651 963 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 TAF3Q5VWG9 929 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 ARHGAP17Q68EM7 881 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 ALKBH5Q6P6C2 394 aaKnown RBP9.79□□□□□ -0.84
ACTN1-218ENST00000556343 LCLAT1Q6UWP7 414 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 CD300LGQ6UXG3 332 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 DDX53Q86TM3 631 aaKnown RBP9.79□□□□□ -0.84
ACTN1-218ENST00000556343 ACOT1Q86TX2 421 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 NOP9Q86U38 636 aaKnown RBP9.79□□□□□ -0.84
ACTN1-218ENST00000556343 TMEM139Q8IV31 216 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 GPR65Q8IYL9 337 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 SLC39A11Q8N1S5 342 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 TMEM130Q8N3G9 435 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 EPS8L1Q8TE68 723 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 KBTBD7Q8WVZ9 684 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 CYFIP2Q96F07 1278 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 CALR3Q96L12 384 aaKnown RBP9.79□□□□□ -0.84
ACTN1-218ENST00000556343 SYT15Q9BQS2 421 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 MED10Q9BTT4 135 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 ELOVL4Q9GZR5 314 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 LHX5Q9H2C1 402 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 KCNF1Q9H3M0 494 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 CACNG4Q9UBN1 327 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 MSRAQ9UJ68 235 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 NOCTQ9UK39 431 aaKnown RBP9.79□□□□□ -0.84
ACTN1-218ENST00000556343 INTUQ9ULD6 942 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 PCDHA13Q9Y5I0 950 aa9.79□□□□□ -0.84
ACTN1-218ENST00000556343 TIMM13Q9Y5L4 95 aaPredicted RBP9.79□□□□□ -0.84
ACTN1-218ENST00000556343 RBAK-RBAKDNI3L0D1 243 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 I3L4J1 428 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 RTN2O75298 545 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 LCA5LO95447 670 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 SOD2P04179 222 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 URODP06132 367 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 MMEP08473 750 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 H2AFZP0C0S5 128 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 SETSIPP0DME0 302 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 BRD2P25440 801 aaKnown RBP9.78□□□□□ -0.84
ACTN1-218ENST00000556343 TKTP29401 623 aaKnown RBP9.78□□□□□ -0.84
ACTN1-218ENST00000556343 BMP8BP34820 402 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 BMPR1AP36894 532 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 FMO1Q01740 532 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 PLCB3Q01970 1234 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 GFPT1Q06210 699 aaPredicted RBP9.78□□□□□ -0.84
ACTN1-218ENST00000556343 SHHQ15465 462 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 IFI16Q16666 785 aaKnown RBP9.78□□□□□ -0.84
ACTN1-218ENST00000556343 CLEC16AQ2KHT3 1053 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 ASTE1Q2TB18 679 aaPredicted RBP9.78□□□□□ -0.84
ACTN1-218ENST00000556343 INTS6LQ5JSJ4 861 aaKnown RBP9.78□□□□□ -0.84
ACTN1-218ENST00000556343 VARS2Q5ST30 1063 aaKnown RBP9.78□□□□□ -0.84
ACTN1-218ENST00000556343 LIN9Q5TKA1 542 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 E4F1Q66K89 784 aaPredicted RBP9.78□□□□□ -0.84
ACTN1-218ENST00000556343 ACAD10Q6JQN1 1059 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 RAD9BQ6WBX8 426 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 H2AFVQ71UI9 128 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 TMCO2Q7Z6W1 182 aaPredicted RBP9.78□□□□□ -0.84
ACTN1-218ENST00000556343 ZSCAN30Q86W11 494 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 OSTM1Q86WC4 334 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 SPATA2LQ8IUW3 424 aaPredicted RBP9.78□□□□□ -0.84
ACTN1-218ENST00000556343 GPIHBP1Q8IV16 184 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 GLYCTKQ8IVS8 523 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 B3GALNT2Q8NCR0 500 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 MYCBPAPQ8TBZ2 947 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 SP7Q8TDD2 431 aaPredicted RBP9.78□□□□□ -0.84
ACTN1-218ENST00000556343 WHAMMQ8TF30 809 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 CLP1Q92989 425 aaKnown RBP9.78□□□□□ -0.84
ACTN1-218ENST00000556343 HERC2P3Q9BVR0 1158 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 SYNCQ9H7C4 482 aa9.78□□□□□ -0.84
ACTN1-218ENST00000556343 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms