RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 K7ESF4 209 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 CYB561D2O14569 222 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 ATG13O75143 517 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 GJB2P29033 226 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 AVPR1AP37288 418 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 SV2CQ496J9 727 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 HEATR6Q6AI08 1181 aaKnown RBP18.31■□□□□ 0.52
XRCC3-215ENST00000555964 TXNDC11Q6PKC3 985 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 Q6ZS52 159 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 WDR5BQ86VZ2 330 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 TMEM130Q8N3G9 435 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 TTC9BQ8N6N2 239 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 KRI1Q8N9T8 703 aaKnown RBP18.31■□□□□ 0.52
XRCC3-215ENST00000555964 RAD54LQ92698 747 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 HVCN1Q96D96 273 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 ZFYVE19Q96K21 471 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 TMEM209Q96SK2 561 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 LPIN3Q9BQK8 851 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 PYM1Q9BRP8 204 aaKnown RBP18.31■□□□□ 0.52
XRCC3-215ENST00000555964 CCSER1Q9C0I3 900 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 ST6GALNAC4Q9H4F1 302 aa18.31■□□□□ 0.52
XRCC3-215ENST00000555964 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.31■□□□□ 0.52
XRCC3-215ENST00000555964 ATG2BQ96BY7 2078 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 CCDC163A0A0D9SF12 145 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.3■□□□□ 0.52
XRCC3-215ENST00000555964 HRO43593 1189 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 SOAT2O75908 522 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 IL18RAPO95256 599 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 PRAMEF12O95522 483 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 ADRB1P08588 477 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 PLCG1P19174 1290 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 PNPLA4P41247 253 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 TSPY1Q01534 308 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 GRSF1Q12849 480 aaKnown RBP eCLIP18.3■□□□□ 0.52
XRCC3-215ENST00000555964 BFSP1Q12934 665 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 POSTNQ15063 836 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 NFE2Q16621 373 aaPredicted RBP18.3■□□□□ 0.52
XRCC3-215ENST00000555964 SLC39A4Q6P5W5 647 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 LARP4BQ92615 738 aaKnown RBP18.3■□□□□ 0.52
XRCC3-215ENST00000555964 LOXL4Q96JB6 756 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 CNTNAP3BQ96NU0 1288 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 CNTNAP3Q9BZ76 1288 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 BLOC1S4Q9NUP1 217 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 DPP3Q9NY33 737 aa18.3■□□□□ 0.52
XRCC3-215ENST00000555964 ABI2Q9NYB9 513 aaPredicted RBP18.3■□□□□ 0.52
XRCC3-215ENST00000555964 AGO2Q9UKV8 859 aaKnown RBP18.3■□□□□ 0.52
XRCC3-215ENST00000555964 HAPLN1P10915 354 aaPredicted RBP18.29■□□□□ 0.52
XRCC3-215ENST00000555964 ATF6P18850 670 aa18.29■□□□□ 0.52
XRCC3-215ENST00000555964 ACOT2P49753 483 aa18.29■□□□□ 0.52
XRCC3-215ENST00000555964 CYP4F8P98187 520 aa18.29■□□□□ 0.52
XRCC3-215ENST00000555964 MCM6Q14566 821 aa18.29■□□□□ 0.52
XRCC3-215ENST00000555964 CC2D1AQ6P1N0 951 aaPredicted RBP18.29■□□□□ 0.52
XRCC3-215ENST00000555964 BRAPQ7Z569 592 aa18.29■□□□□ 0.52
XRCC3-215ENST00000555964 GPIHBP1Q8IV16 184 aa18.29■□□□□ 0.52
XRCC3-215ENST00000555964 CMTM8Q8IZV2 173 aa18.29■□□□□ 0.52
XRCC3-215ENST00000555964 TTC8Q8TAM2 541 aa18.29■□□□□ 0.52
XRCC3-215ENST00000555964 TMX3Q96JJ7 454 aa18.29■□□□□ 0.52
XRCC3-215ENST00000555964 LRRC3BQ96PB8 259 aa18.29■□□□□ 0.52
XRCC3-215ENST00000555964 IL21Q9HBE4 155 aa18.29■□□□□ 0.52
XRCC3-215ENST00000555964 UXTQ9UBK9 157 aaPredicted RBP18.29■□□□□ 0.52
XRCC3-215ENST00000555964 EXOC7Q9UPT5 735 aa18.29■□□□□ 0.52
XRCC3-215ENST00000555964 SMC3Q9UQE7 1217 aa18.29■□□□□ 0.52
XRCC3-215ENST00000555964 PCDHB5Q9Y5E4 795 aa18.29■□□□□ 0.52
XRCC3-215ENST00000555964 STYXL1Q9Y6J8 313 aa18.29■□□□□ 0.52
XRCC3-215ENST00000555964 CSH1P0DML2 217 aa18.28■□□□□ 0.52
XRCC3-215ENST00000555964 CSH2P0DML3 217 aa18.28■□□□□ 0.52
XRCC3-215ENST00000555964 NMT1P30419 496 aaKnown RBP18.28■□□□□ 0.52
XRCC3-215ENST00000555964 TNK2Q07912 1038 aa18.28■□□□□ 0.52
XRCC3-215ENST00000555964 DMWDQ09019 674 aa18.28■□□□□ 0.52
XRCC3-215ENST00000555964 KARSQ15046 597 aaKnown RBP18.28■□□□□ 0.52
XRCC3-215ENST00000555964 PPM1JQ5JR12 505 aa18.28■□□□□ 0.52
XRCC3-215ENST00000555964 IL31Q6EBC2 164 aa18.28■□□□□ 0.52
XRCC3-215ENST00000555964 FAM160A2Q8N612 972 aaPredicted RBP18.28■□□□□ 0.52
XRCC3-215ENST00000555964 POMGNT1Q8WZA1 660 aa18.28■□□□□ 0.52
XRCC3-215ENST00000555964 MRPS31Q92665 395 aaKnown RBP18.28■□□□□ 0.52
XRCC3-215ENST00000555964 SEL1LQ9UBV2 794 aa18.28■□□□□ 0.52
XRCC3-215ENST00000555964 SLC8A2Q9UPR5 921 aa18.28■□□□□ 0.52
XRCC3-215ENST00000555964 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.28■□□□□ 0.52
XRCC3-215ENST00000555964 KPNA7A9QM74 516 aa18.27■□□□□ 0.52
XRCC3-215ENST00000555964 AKAP3O75969 853 aa18.27■□□□□ 0.52
XRCC3-215ENST00000555964 RUNX3Q13761 415 aa18.27■□□□□ 0.52
XRCC3-215ENST00000555964 WSCD1Q658N2 575 aa18.27■□□□□ 0.52
XRCC3-215ENST00000555964 CACNA2D4Q7Z3S7 1137 aa18.27■□□□□ 0.52
XRCC3-215ENST00000555964 C12orf50Q8NA57 414 aaPredicted RBP18.27■□□□□ 0.52
XRCC3-215ENST00000555964 GIPC2Q8TF65 315 aa18.27■□□□□ 0.52
XRCC3-215ENST00000555964 GAB3Q8WWW8 586 aa18.27■□□□□ 0.52
XRCC3-215ENST00000555964 FIZ1Q96SL8 496 aa18.27■□□□□ 0.52
XRCC3-215ENST00000555964 SLC46A2Q9BY10 475 aa18.27■□□□□ 0.52
XRCC3-215ENST00000555964 ABCB6Q9NP58 842 aa18.27■□□□□ 0.52
XRCC3-215ENST00000555964 GKN1Q9NS71 199 aa18.27■□□□□ 0.52
XRCC3-215ENST00000555964 CCDC39Q9UFE4 941 aa18.27■□□□□ 0.52
XRCC3-215ENST00000555964 RPP40O75818 363 aaKnown RBP18.26■□□□□ 0.51
XRCC3-215ENST00000555964 CCDC192P0DO97 292 aa18.26■□□□□ 0.51
XRCC3-215ENST00000555964 DDIT3P35638 169 aa18.26■□□□□ 0.51
XRCC3-215ENST00000555964 LIMK1P53667 647 aa18.26■□□□□ 0.51
XRCC3-215ENST00000555964 NLRP12P59046 1061 aa18.26■□□□□ 0.51
XRCC3-215ENST00000555964 RPL10AP62906 217 aaKnown RBP18.26■□□□□ 0.51
XRCC3-215ENST00000555964 SRSF5Q13243 272 aaKnown RBP18.26■□□□□ 0.51
XRCC3-215ENST00000555964 ZNF268Q14587 947 aaPredicted RBP18.26■□□□□ 0.51
XRCC3-215ENST00000555964 PDGFRLQ15198 375 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms