RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 SOWAHAQ2M3V2 549 aa24.5■■□□□ 1.51
CDKN3-208ENST00000555837 TDRD10Q5VZ19 366 aaKnown RBP24.5■■□□□ 1.51
CDKN3-208ENST00000555837 KRT39Q6A163 491 aa24.5■■□□□ 1.51
CDKN3-208ENST00000555837 ISM2Q6H9L7 571 aa24.5■■□□□ 1.51
CDKN3-208ENST00000555837 SV2AQ7L0J3 742 aa24.5■■□□□ 1.51
CDKN3-208ENST00000555837 FILIP1Q7Z7B0 1213 aa24.5■■□□□ 1.51
CDKN3-208ENST00000555837 TMEM130Q8N3G9 435 aa24.5■■□□□ 1.51
CDKN3-208ENST00000555837 TTC39CQ8N584 583 aa24.5■■□□□ 1.51
CDKN3-208ENST00000555837 FUBP3Q96I24 572 aaKnown RBP eCLIP24.5■■□□□ 1.51
CDKN3-208ENST00000555837 IGSF9Q9P2J2 1179 aa24.5■■□□□ 1.51
CDKN3-208ENST00000555837 SPTBN5Q9NRC6 3674 aaKnown RBP24.49■■□□□ 1.51
CDKN3-208ENST00000555837 TTC28Q96AY4 2481 aa24.49■■□□□ 1.51
CDKN3-208ENST00000555837 BIN1O00499 593 aa24.49■■□□□ 1.51
CDKN3-208ENST00000555837 MBD3O95983 291 aa24.49■■□□□ 1.51
CDKN3-208ENST00000555837 GNL1P36915 607 aaPredicted RBP24.49■■□□□ 1.51
CDKN3-208ENST00000555837 MYL6P60660 151 aa24.49■■□□□ 1.51
CDKN3-208ENST00000555837 RPL10AP62906 217 aaKnown RBP24.49■■□□□ 1.51
CDKN3-208ENST00000555837 TWF1Q12792 350 aa24.49■■□□□ 1.51
CDKN3-208ENST00000555837 INTS6LQ5JSJ4 861 aaKnown RBP24.49■■□□□ 1.51
CDKN3-208ENST00000555837 KLHL10Q6JEL2 608 aa24.49■■□□□ 1.51
CDKN3-208ENST00000555837 PDZD4Q76G19 769 aaPredicted RBP24.49■■□□□ 1.51
CDKN3-208ENST00000555837 LIMS2Q7Z4I7 341 aa24.49■■□□□ 1.51
CDKN3-208ENST00000555837 FRMD5Q7Z6J6 570 aa24.49■■□□□ 1.51
CDKN3-208ENST00000555837 ZC3H3Q8IXZ2 948 aaKnown RBP24.49■■□□□ 1.51
CDKN3-208ENST00000555837 OR10T2Q8NGX3 314 aa24.49■■□□□ 1.51
CDKN3-208ENST00000555837 NELFBQ8WX92 580 aa24.49■■□□□ 1.51
CDKN3-208ENST00000555837 PGLYRP2Q96PD5 576 aa24.49■■□□□ 1.51
CDKN3-208ENST00000555837 ASAH2Q9NR71 780 aa24.49■■□□□ 1.51
CDKN3-208ENST00000555837 NXF1Q9UBU9 619 aaKnown RBP24.49■■□□□ 1.51
CDKN3-208ENST00000555837 MRPS23Q9Y3D9 190 aaKnown RBP24.49■■□□□ 1.51
CDKN3-208ENST00000555837 C2CD4DB7Z1M9 353 aa24.48■■□□□ 1.51
CDKN3-208ENST00000555837 PI4K2BG5E9Z4 385 aa24.48■■□□□ 1.51
CDKN3-208ENST00000555837 SEC24AO95486 1093 aa24.48■■□□□ 1.51
CDKN3-208ENST00000555837 OR4Q2P0C623 313 aa24.48■■□□□ 1.51
CDKN3-208ENST00000555837 MGAT5BQ3V5L5 792 aa24.48■■□□□ 1.51
CDKN3-208ENST00000555837 TCERG1LQ5VWI1 586 aa24.48■■□□□ 1.51
CDKN3-208ENST00000555837 SPATA2LQ8IUW3 424 aaPredicted RBP24.48■■□□□ 1.51
CDKN3-208ENST00000555837 UBALD2Q8IYN6 164 aa24.48■■□□□ 1.51
CDKN3-208ENST00000555837 OR6B3Q8NGW1 331 aa24.48■■□□□ 1.51
CDKN3-208ENST00000555837 TNIP3Q96KP6 325 aa24.48■■□□□ 1.51
CDKN3-208ENST00000555837 CEP295NLQ96MC4 621 aa24.48■■□□□ 1.51
CDKN3-208ENST00000555837 GPR88Q9GZN0 384 aa24.48■■□□□ 1.51
CDKN3-208ENST00000555837 GZF1Q9H116 711 aaPredicted RBP24.48■■□□□ 1.51
CDKN3-208ENST00000555837 FAM124BQ9H5Z6 455 aaPredicted RBP24.48■■□□□ 1.51
CDKN3-208ENST00000555837 LMBRD1Q9NUN5 540 aa24.48■■□□□ 1.51
CDKN3-208ENST00000555837 EPS15L1Q9UBC2 864 aa24.48■■□□□ 1.51
CDKN3-208ENST00000555837 YIPF1Q9Y548 306 aa24.48■■□□□ 1.51
CDKN3-208ENST00000555837 N4BP1O75113 896 aaKnown RBP24.47■■□□□ 1.51
CDKN3-208ENST00000555837 DLG4P78352 724 aa24.47■■□□□ 1.51
CDKN3-208ENST00000555837 CCDC40Q4G0X9 1142 aa24.47■■□□□ 1.51
CDKN3-208ENST00000555837 CT47A1Q5JQC4 288 aaPredicted RBP24.47■■□□□ 1.51
CDKN3-208ENST00000555837 WDR44Q5JSH3 913 aa24.47■■□□□ 1.51
CDKN3-208ENST00000555837 MTSS1LQ765P7 747 aa24.47■■□□□ 1.51
CDKN3-208ENST00000555837 GET4Q7L5D6 327 aaPredicted RBP24.47■■□□□ 1.51
CDKN3-208ENST00000555837 FAM200AQ8TCP9 573 aa24.47■■□□□ 1.51
CDKN3-208ENST00000555837 PLEKHO2Q8TD55 490 aa24.47■■□□□ 1.51
CDKN3-208ENST00000555837 XYLT2Q9H1B5 865 aa24.47■■□□□ 1.51
CDKN3-208ENST00000555837 GDE1Q9NZC3 331 aa24.47■■□□□ 1.51
CDKN3-208ENST00000555837 EHD2Q9NZN4 543 aa24.47■■□□□ 1.51
CDKN3-208ENST00000555837 ZMYM5Q9UJ78 669 aa24.47■■□□□ 1.51
CDKN3-208ENST00000555837 CDH7Q9ULB5 785 aa24.47■■□□□ 1.51
CDKN3-208ENST00000555837 PPP1R3GB7ZBB8 358 aa24.46■■□□□ 1.51
CDKN3-208ENST00000555837 RHOP08100 348 aa24.46■■□□□ 1.51
CDKN3-208ENST00000555837 PRKCSHP14314 528 aaPredicted RBP24.46■■□□□ 1.51
CDKN3-208ENST00000555837 GCLMP48507 274 aa24.46■■□□□ 1.51
CDKN3-208ENST00000555837 MXI1P50539 228 aa24.46■■□□□ 1.51
CDKN3-208ENST00000555837 MTMR3Q13615 1198 aa24.46■■□□□ 1.51
CDKN3-208ENST00000555837 CFAP221Q4G0U5 840 aa24.46■■□□□ 1.51
CDKN3-208ENST00000555837 ATAD1Q8NBU5 361 aa24.46■■□□□ 1.51
CDKN3-208ENST00000555837 SEPT5Q99719 369 aaPredicted RBP24.46■■□□□ 1.51
CDKN3-208ENST00000555837 RTP3Q9BQQ7 232 aa24.46■■□□□ 1.51
CDKN3-208ENST00000555837 SYT15Q9BQS2 421 aa24.46■■□□□ 1.51
CDKN3-208ENST00000555837 CORO1BQ9BR76 489 aa24.46■■□□□ 1.51
CDKN3-208ENST00000555837 CD320Q9NPF0 282 aa24.46■■□□□ 1.51
CDKN3-208ENST00000555837 ABI2Q9NYB9 513 aaPredicted RBP24.46■■□□□ 1.51
CDKN3-208ENST00000555837 DNMT3BQ9UBC3 853 aaKnown RBP24.46■■□□□ 1.51
CDKN3-208ENST00000555837 SORCS3Q9UPU3 1222 aa24.46■■□□□ 1.51
CDKN3-208ENST00000555837 TSC2P49815 1807 aa24.45■■□□□ 1.5
CDKN3-208ENST00000555837 ATP8B3O60423 1300 aa24.45■■□□□ 1.5
CDKN3-208ENST00000555837 ASS1P00966 412 aaKnown RBP24.45■■□□□ 1.5
CDKN3-208ENST00000555837 HLA-DRAP01903 254 aa24.45■■□□□ 1.5
CDKN3-208ENST00000555837 CCDC192P0DO97 292 aa24.45■■□□□ 1.5
CDKN3-208ENST00000555837 LAMP2P13473 410 aa24.45■■□□□ 1.5
CDKN3-208ENST00000555837 SP100P23497 879 aaPredicted RBP24.45■■□□□ 1.5
CDKN3-208ENST00000555837 PTPN21Q16825 1174 aa24.45■■□□□ 1.5
CDKN3-208ENST00000555837 DCAF17Q5H9S7 520 aaPredicted RBP24.45■■□□□ 1.5
CDKN3-208ENST00000555837 FBXL13Q8NEE6 735 aa24.45■■□□□ 1.5
CDKN3-208ENST00000555837 GCNAQ96QF7 691 aa24.45■■□□□ 1.5
CDKN3-208ENST00000555837 CYP3A43Q9HB55 503 aa24.45■■□□□ 1.5
CDKN3-208ENST00000555837 MAGEC2Q9UBF1 373 aaPredicted RBP24.45■■□□□ 1.5
CDKN3-208ENST00000555837 RWDD2AQ9UIY3 292 aa24.45■■□□□ 1.5
CDKN3-208ENST00000555837 CDH22Q9UJ99 828 aa24.45■■□□□ 1.5
CDKN3-208ENST00000555837 CTNND2Q9UQB3 1225 aa24.45■■□□□ 1.5
CDKN3-208ENST00000555837 CUL9Q8IWT3 2517 aa24.45■■□□□ 1.5
CDKN3-208ENST00000555837 C2orf16Q68DN1 1984 aa24.44■■□□□ 1.5
CDKN3-208ENST00000555837 A8MXQ7 604 aa24.44■■□□□ 1.5
CDKN3-208ENST00000555837 TRIM49P0CI25 452 aa24.44■■□□□ 1.5
CDKN3-208ENST00000555837 TRIM49CP0CI26 452 aa24.44■■□□□ 1.5
CDKN3-208ENST00000555837 HAPLN1P10915 354 aaPredicted RBP24.44■■□□□ 1.5
CDKN3-208ENST00000555837 TTI2Q6NXR4 508 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms