RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 C1orf228Q6PIY5 440 aa11.73□□□□□ -0.53
TDP1-212ENST00000555565 SHKBP1Q8TBC3 707 aa11.73□□□□□ -0.53
TDP1-212ENST00000555565 TCEAL3Q969E4 200 aa11.73□□□□□ -0.53
TDP1-212ENST00000555565 MKNK1Q9BUB5 465 aa11.73□□□□□ -0.53
TDP1-212ENST00000555565 C8orf33Q9H7E9 229 aaPredicted RBP11.73□□□□□ -0.53
TDP1-212ENST00000555565 RPF1Q9H9Y2 349 aaKnown RBP11.73□□□□□ -0.53
TDP1-212ENST00000555565 GTSE1Q9NYZ3 720 aa11.73□□□□□ -0.53
TDP1-212ENST00000555565 FBXO2Q9UK22 296 aaPredicted RBP11.73□□□□□ -0.53
TDP1-212ENST00000555565 CPSF3Q9UKF6 684 aaKnown RBP11.73□□□□□ -0.53
TDP1-212ENST00000555565 PCDHGA5Q9Y5G8 931 aa11.73□□□□□ -0.53
TDP1-212ENST00000555565 TIMM13Q9Y5L4 95 aaPredicted RBP11.73□□□□□ -0.53
TDP1-212ENST00000555565 SRPRBQ9Y5M8 271 aaKnown RBP11.73□□□□□ -0.53
TDP1-212ENST00000555565 TISP43B9A030 160 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 ANKRD63C9JTQ0 380 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 RPP40O75818 363 aaKnown RBP11.72□□□□□ -0.53
TDP1-212ENST00000555565 OAZ2O95190 189 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 VNN2O95498 520 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 YWHAHQ04917 246 aaPredicted RBP11.72□□□□□ -0.53
TDP1-212ENST00000555565 RING1Q06587 406 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 SPATA1Q5VX52 437 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 JADE1Q6IE81 842 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 RNF19BQ6ZMZ0 732 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 RALGPS2Q86X27 583 aaPredicted RBP11.72□□□□□ -0.53
TDP1-212ENST00000555565 GPIHBP1Q8IV16 184 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 SYNPOQ8N3V7 929 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 BEST2Q8NFU1 509 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 CLIC6Q96NY7 704 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 TSPAN18Q96SJ8 248 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 MSTO1Q9BUK6 570 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 IKZF4Q9H2S9 585 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 ST6GALNAC4Q9H4F1 302 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 STK17AQ9UEE5 414 aa11.72□□□□□ -0.53
TDP1-212ENST00000555565 AFF4Q9UHB7 1163 aaKnown RBP11.72□□□□□ -0.53
TDP1-212ENST00000555565 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.72□□□□□ -0.53
TDP1-212ENST00000555565 SOBPA7XYQ1 873 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 XPOTO43592 962 aaKnown RBP11.71□□□□□ -0.53
TDP1-212ENST00000555565 OR4Q2P0C623 313 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 MYL4P12829 197 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 CPB1P15086 417 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 ABCD1P33897 745 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 MPLP40238 635 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 ACOT2P49753 483 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 NOVA1P51513 510 aaKnown RBP11.71□□□□□ -0.53
TDP1-212ENST00000555565 KPNA1P52294 538 aaPredicted RBP11.71□□□□□ -0.53
TDP1-212ENST00000555565 CEBPZQ03701 1054 aaKnown RBP11.71□□□□□ -0.53
TDP1-212ENST00000555565 TWF1Q12792 350 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 PON2Q15165 354 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 STXBP5Q5T5C0 1151 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 RNF43Q68DV7 783 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 DYMQ7RTS9 669 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 ZNF720Q7Z2F6 126 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 SFR1Q86XK3 245 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 TMC8Q8IU68 726 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 CD302Q8IX05 232 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 KRI1Q8N9T8 703 aaKnown RBP11.71□□□□□ -0.53
TDP1-212ENST00000555565 LEMD2Q8NC56 503 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 TTC8Q8TAM2 541 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 CSGALNACT1Q8TDX6 532 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 E2F7Q96AV8 911 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 DNAJC19Q96DA6 116 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 FAM212AQ96EL1 285 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 CHFRQ96EP1 664 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 INTS4Q96HW7 963 aaKnown RBP11.71□□□□□ -0.53
TDP1-212ENST00000555565 ZFYVE19Q96K21 471 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 ZNF512Q96ME7 567 aaPredicted RBP11.71□□□□□ -0.53
TDP1-212ENST00000555565 ADAM33Q9BZ11 813 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 GPR88Q9GZN0 384 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 VPS45Q9NRW7 570 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 POLR3BQ9NW08 1133 aaPredicted RBP11.71□□□□□ -0.53
TDP1-212ENST00000555565 MAFFQ9ULX9 164 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 MTMR6Q9Y217 621 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 STYXL1Q9Y6J8 313 aa11.71□□□□□ -0.53
TDP1-212ENST00000555565 NBEAQ8NFP9 2946 aa11.71□□□□□ -0.54
TDP1-212ENST00000555565 DSPP15924 2871 aaKnown RBP11.71□□□□□ -0.54
TDP1-212ENST00000555565 LOC400499M0QZD8 3231 aa11.71□□□□□ -0.54
TDP1-212ENST00000555565 TMEM8BA6NDV4 472 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 MYMKA6NI61 221 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 C4orf47A7E2U8 309 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 PPP1R37O75864 691 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 AKAP3O75969 853 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 NFICP08651 508 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 LILRA4P59901 499 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 FOXC1Q12948 553 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 PLK5Q496M5 336 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 RRAGBQ5VZM2 374 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 ADALQ6DHV7 355 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 IQCEQ6IPM2 695 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 DSTYKQ6XUX3 929 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 ARID3BQ8IVW6 561 aaPredicted RBP11.7□□□□□ -0.54
TDP1-212ENST00000555565 SENP8Q96LD8 212 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 PGLYRP2Q96PD5 576 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 USP28Q96RU2 1077 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 STRA6Q9BX79 667 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 BACH2Q9BYV9 841 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 DUSP15Q9H1R2 295 aaPredicted RBP11.7□□□□□ -0.54
TDP1-212ENST00000555565 DNAJC25Q9H1X3 360 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 CRISPLD1Q9H336 500 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 CCDC39Q9UFE4 941 aa11.7□□□□□ -0.54
TDP1-212ENST00000555565 AGO2Q9UKV8 859 aaKnown RBP11.7□□□□□ -0.54
TDP1-212ENST00000555565 DERAQ9Y315 318 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms