RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ASAH2Q9NR71 780 aa22.01■■□□□ 1.11
VTI1B-205ENST00000555543 ABI2Q9NYB9 513 aaPredicted RBP22.01■■□□□ 1.11
VTI1B-205ENST00000555543 HSFX1Q9UBD0 423 aa22.01■■□□□ 1.11
VTI1B-205ENST00000555543 MYL4P12829 197 aa22■■□□□ 1.11
VTI1B-205ENST00000555543 GJA1P17302 382 aa22■■□□□ 1.11
VTI1B-205ENST00000555543 NR2F2P24468 414 aa22■■□□□ 1.11
VTI1B-205ENST00000555543 ALDH1A3P47895 512 aa22■■□□□ 1.11
VTI1B-205ENST00000555543 EPHB3P54753 998 aa22■■□□□ 1.11
VTI1B-205ENST00000555543 MYL6P60660 151 aa22■■□□□ 1.11
VTI1B-205ENST00000555543 TSPY1Q01534 308 aa22■■□□□ 1.11
VTI1B-205ENST00000555543 INTS6LQ5JSJ4 861 aaKnown RBP22■■□□□ 1.11
VTI1B-205ENST00000555543 CEP135Q66GS9 1140 aa22■■□□□ 1.11
VTI1B-205ENST00000555543 DCP1BQ8IZD4 617 aaKnown RBP22■■□□□ 1.11
VTI1B-205ENST00000555543 SPATA20Q8TB22 786 aa22■■□□□ 1.11
VTI1B-205ENST00000555543 TIGD1Q96MW7 591 aa22■■□□□ 1.11
VTI1B-205ENST00000555543 KXD1Q9BQD3 176 aa22■■□□□ 1.11
VTI1B-205ENST00000555543 LPIN3Q9BQK8 851 aa22■■□□□ 1.11
VTI1B-205ENST00000555543 ACBD6Q9BR61 282 aa22■■□□□ 1.11
VTI1B-205ENST00000555543 XYLT2Q9H1B5 865 aa22■■□□□ 1.11
VTI1B-205ENST00000555543 MYL7Q01449 175 aa21.99■■□□□ 1.11
VTI1B-205ENST00000555543 NFIL3Q16649 462 aa21.99■■□□□ 1.11
VTI1B-205ENST00000555543 MGAT5BQ3V5L5 792 aa21.99■■□□□ 1.11
VTI1B-205ENST00000555543 C1orf220Q5T0J3 134 aa21.99■■□□□ 1.11
VTI1B-205ENST00000555543 CYP4A22Q5TCH4 519 aa21.99■■□□□ 1.11
VTI1B-205ENST00000555543 DPH6Q7L8W6 267 aa21.99■■□□□ 1.11
VTI1B-205ENST00000555543 FBXL6Q8N531 539 aa21.99■■□□□ 1.11
VTI1B-205ENST00000555543 SHKBP1Q8TBC3 707 aa21.99■■□□□ 1.11
VTI1B-205ENST00000555543 SPATA18Q8TC71 538 aa21.99■■□□□ 1.11
VTI1B-205ENST00000555543 SPPL2BQ8TCT7 592 aa21.99■■□□□ 1.11
VTI1B-205ENST00000555543 C2orf15Q8WU43 125 aaKnown RBP21.99■■□□□ 1.11
VTI1B-205ENST00000555543 ZNF334Q9HCZ1 680 aaPredicted RBP21.99■■□□□ 1.11
VTI1B-205ENST00000555543 GDE1Q9NZC3 331 aa21.99■■□□□ 1.11
VTI1B-205ENST00000555543 PCDHA5Q9Y5H7 936 aa21.99■■□□□ 1.11
VTI1B-205ENST00000555543 MUC6Q6W4X9 2439 aa21.99■■□□□ 1.11
VTI1B-205ENST00000555543 ZNF197O14709 1029 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 AKAP3O75969 853 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 MICAL2O94851 1124 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 HAPLN1P10915 354 aaPredicted RBP21.98■■□□□ 1.11
VTI1B-205ENST00000555543 LMO2P25791 158 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 LHX1P48742 406 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 SMARCB1Q12824 385 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 BIRC3Q13489 604 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 MTSS1LQ765P7 747 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 PSMG2Q969U7 264 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 ELMO3Q96BJ8 720 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 GSDMAQ96QA5 445 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 MMS19Q96T76 1030 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 PI4K2AQ9BTU6 479 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 RMND1Q9NWS8 449 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 GTF3C4Q9UKN8 822 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 FRMD4BQ9Y2L6 1034 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 HCN4Q9Y3Q4 1203 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 NME7Q9Y5B8 376 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 PCDHB5Q9Y5E4 795 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 KMT2EQ8IZD2 1858 aa21.98■■□□□ 1.11
VTI1B-205ENST00000555543 ATP2C2O75185 946 aa21.97■■□□□ 1.11
VTI1B-205ENST00000555543 VNN1O95497 513 aa21.97■■□□□ 1.11
VTI1B-205ENST00000555543 STAU1O95793 577 aaKnown RBP21.97■■□□□ 1.11
VTI1B-205ENST00000555543 C4BPAP04003 597 aaKnown RBP21.97■■□□□ 1.11
VTI1B-205ENST00000555543 CFHP08603 1231 aa21.97■■□□□ 1.11
VTI1B-205ENST00000555543 SRFP11831 508 aa21.97■■□□□ 1.11
VTI1B-205ENST00000555543 WARSP23381 471 aaKnown RBP21.97■■□□□ 1.11
VTI1B-205ENST00000555543 FCARP24071 287 aa21.97■■□□□ 1.11
VTI1B-205ENST00000555543 PRCPP42785 496 aa21.97■■□□□ 1.11
VTI1B-205ENST00000555543 TUFMP49411 452 aaKnown RBP21.97■■□□□ 1.11
VTI1B-205ENST00000555543 GPR15P49685 360 aa21.97■■□□□ 1.11
VTI1B-205ENST00000555543 VCPP55072 806 aaKnown RBP21.97■■□□□ 1.11
VTI1B-205ENST00000555543 TRPC3Q13507 836 aa21.97■■□□□ 1.11
VTI1B-205ENST00000555543 WDR72Q3MJ13 1102 aa21.97■■□□□ 1.11
VTI1B-205ENST00000555543 DNAJB7Q7Z6W7 309 aaPredicted RBP21.97■■□□□ 1.11
VTI1B-205ENST00000555543 LEMD2Q8NC56 503 aa21.97■■□□□ 1.11
VTI1B-205ENST00000555543 TMC2Q8TDI7 906 aa21.97■■□□□ 1.11
VTI1B-205ENST00000555543 GPR152Q8TDT2 470 aa21.97■■□□□ 1.11
VTI1B-205ENST00000555543 ZSWIM3Q96MP5 696 aa21.97■■□□□ 1.11
VTI1B-205ENST00000555543 MRPL45Q9BRJ2 306 aaKnown RBP21.97■■□□□ 1.11
VTI1B-205ENST00000555543 CHMP5Q9NZZ3 219 aa21.97■■□□□ 1.11
VTI1B-205ENST00000555543 ASB3Q9Y575 518 aa21.97■■□□□ 1.11
VTI1B-205ENST00000555543 A0A1W2PRU2 124 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 MYBPHLA2RUH7 354 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 MAPK13O15264 365 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 PHACTR2O75167 634 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 SMC2O95347 1197 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 PCSK1P29120 753 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 PSMC1P62191 440 aaKnown RBP21.96■■□□□ 1.11
VTI1B-205ENST00000555543 NCOA4Q13772 614 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 TEAD2Q15562 447 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 NFE2Q16621 373 aaPredicted RBP21.96■■□□□ 1.11
VTI1B-205ENST00000555543 FAM78AQ5JUQ0 283 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 ZNF658Q5TYW1 1059 aaPredicted RBP21.96■■□□□ 1.11
VTI1B-205ENST00000555543 GAREM2Q75VX8 874 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 SUGP1Q8IWZ8 645 aaKnown RBP21.96■■□□□ 1.11
VTI1B-205ENST00000555543 STKLD1Q8NE28 680 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 GIPC2Q8TF65 315 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 SMARCE1Q969G3 411 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 EEF2KMTQ96G04 330 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 SYT15Q9BQS2 421 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 PLA2G2FQ9BZM2 168 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 CRTAC1Q9NQ79 661 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 FBXL21Q9UKT6 434 aa21.96■■□□□ 1.11
VTI1B-205ENST00000555543 KINO60870 393 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms