RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 STKLD1Q8NE28 680 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 FGF14Q92915 247 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 SMARCE1Q969G3 411 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 GSDMAQ96QA5 445 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 MRPL45Q9BRJ2 306 aaKnown RBP14.68□□□□□ -0.06
SNX6-203ENST00000555416 ZNF334Q9HCZ1 680 aaPredicted RBP14.68□□□□□ -0.06
SNX6-203ENST00000555416 AVENQ9NQS1 362 aaPredicted RBP14.68□□□□□ -0.06
SNX6-203ENST00000555416 MAN1B1Q9UKM7 699 aa14.68□□□□□ -0.06
SNX6-203ENST00000555416 MRPS23Q9Y3D9 190 aaKnown RBP14.68□□□□□ -0.06
SNX6-203ENST00000555416 PRR33A8MZF0 331 aa14.67□□□□□ -0.06
SNX6-203ENST00000555416 PRPF40AO75400 957 aaKnown RBP14.67□□□□□ -0.06
SNX6-203ENST00000555416 TRIM49P0CI25 452 aa14.67□□□□□ -0.06
SNX6-203ENST00000555416 TRIM49CP0CI26 452 aa14.67□□□□□ -0.06
SNX6-203ENST00000555416 EPHA5P54756 1037 aa14.67□□□□□ -0.06
SNX6-203ENST00000555416 SIGLEC14Q08ET2 396 aa14.67□□□□□ -0.06
SNX6-203ENST00000555416 MYO1EQ12965 1108 aa14.67□□□□□ -0.06
SNX6-203ENST00000555416 MTMR3Q13615 1198 aa14.67□□□□□ -0.06
SNX6-203ENST00000555416 INTS6LQ5JSJ4 861 aaKnown RBP14.67□□□□□ -0.06
SNX6-203ENST00000555416 TMC8Q8IU68 726 aa14.67□□□□□ -0.06
SNX6-203ENST00000555416 TMC2Q8TDI7 906 aa14.67□□□□□ -0.06
SNX6-203ENST00000555416 GPR152Q8TDT2 470 aa14.67□□□□□ -0.06
SNX6-203ENST00000555416 MCRS1Q96EZ8 462 aa14.67□□□□□ -0.06
SNX6-203ENST00000555416 ZSWIM3Q96MP5 696 aa14.67□□□□□ -0.06
SNX6-203ENST00000555416 SEPT5Q99719 369 aaPredicted RBP14.67□□□□□ -0.06
SNX6-203ENST00000555416 PI4K2AQ9BTU6 479 aa14.67□□□□□ -0.06
SNX6-203ENST00000555416 ABI2Q9NYB9 513 aaPredicted RBP14.67□□□□□ -0.06
SNX6-203ENST00000555416 GTF3C4Q9UKN8 822 aa14.67□□□□□ -0.06
SNX6-203ENST00000555416 NUMBLQ9Y6R0 609 aa14.67□□□□□ -0.06
SNX6-203ENST00000555416 MYBPHLA2RUH7 354 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 TRIM49BA6NDI0 452 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 KINO60870 393 aaKnown RBP14.66□□□□□ -0.06
SNX6-203ENST00000555416 LRRN2O75325 713 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 KIF20AO95235 890 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 SMC2O95347 1197 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 PDGFRBP09619 1106 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 HAPLN1P10915 354 aaPredicted RBP14.66□□□□□ -0.06
SNX6-203ENST00000555416 MYL4P12829 197 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 COL9A1P20849 921 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 PSMC1P62191 440 aaKnown RBP14.66□□□□□ -0.06
SNX6-203ENST00000555416 PPP3CAQ08209 521 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 ADAM9Q13443 819 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 BIRC3Q13489 604 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 TDGQ13569 410 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 WDR72Q3MJ13 1102 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 ZACNQ401N2 412 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 COBLL1Q53SF7 1204 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 SDHAF4Q5VUM1 108 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 ANKRD40Q6AI12 368 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 SV2AQ7L0J3 742 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 ADSSL1Q8N142 457 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 TMEM86AQ8N2M4 240 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 GIPC2Q8TF65 315 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 ZNF512Q96ME7 567 aaPredicted RBP14.66□□□□□ -0.06
SNX6-203ENST00000555416 MMS19Q96T76 1030 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 ACBD6Q9BR61 282 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 SDCBP2Q9H190 292 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 CRTAC1Q9NQ79 661 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.66□□□□□ -0.062e-9■■■■■ 223.6
SNX6-203ENST00000555416 RMND1Q9NWS8 449 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 FRMD4BQ9Y2L6 1034 aa14.66□□□□□ -0.06
SNX6-203ENST00000555416 BIN1O00499 593 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 PHACTR2O75167 634 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 WARSP23381 471 aaKnown RBP14.65□□□□□ -0.06
SNX6-203ENST00000555416 CYP2F1P24903 491 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 RAP1GAPP47736 663 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 ALDH1A3P47895 512 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 VAMP7P51809 220 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 EPHB3P54753 998 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 CDH8P55286 799 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 TSPY1Q01534 308 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 TRPC3Q13507 836 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 NCOA4Q13772 614 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 EDRF1Q3B7T1 1238 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 MGAT5BQ3V5L5 792 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 STXBP5Q5T5C0 1151 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 IER5LQ5T953 404 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 SPOPLQ6IQ16 392 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 GAREM2Q75VX8 874 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 PDZD4Q76G19 769 aaPredicted RBP14.65□□□□□ -0.06
SNX6-203ENST00000555416 DPH6Q7L8W6 267 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 DNAJB7Q7Z6W7 309 aaPredicted RBP14.65□□□□□ -0.06
SNX6-203ENST00000555416 ELOA2Q8IYF1 753 aaPredicted RBP14.65□□□□□ -0.06
SNX6-203ENST00000555416 FAM186BQ8IYM0 893 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 DCP1BQ8IZD4 617 aaKnown RBP14.65□□□□□ -0.06
SNX6-203ENST00000555416 SHKBP1Q8TBC3 707 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 CCDC34Q96HJ3 373 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 KXD1Q9BQD3 176 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 PLA2G2FQ9BZM2 168 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 DPEP3Q9H4B8 488 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 SMYD3Q9H7B4 428 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 IGSF9Q9P2J2 1179 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 NXF1Q9UBU9 619 aaKnown RBP14.65□□□□□ -0.06
SNX6-203ENST00000555416 DUSP12Q9UNI6 340 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 R3HCC1Q9Y3T6 440 aaKnown RBP14.65□□□□□ -0.06
SNX6-203ENST00000555416 NCANO14594 1321 aa14.65□□□□□ -0.06
SNX6-203ENST00000555416 MAPK13O15264 365 aa14.64□□□□□ -0.07
SNX6-203ENST00000555416 STAU1O95793 577 aaKnown RBP14.64□□□□□ -0.07
SNX6-203ENST00000555416 FCARP24071 287 aa14.64□□□□□ -0.07
SNX6-203ENST00000555416 PSMC2P35998 433 aaKnown RBP14.64□□□□□ -0.07
SNX6-203ENST00000555416 GCLMP48507 274 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms