RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 KPNA7A9QM74 516 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 MAPK13O15264 365 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 LINC01565O15544 149 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 VNN1O95497 513 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 HLA-DRAP01903 254 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 C4BPAP04003 597 aaKnown RBP10.55□□□□□ -0.72
PSEN1-213ENST00000555386 CNPP09543 421 aaKnown RBP10.55□□□□□ -0.72
PSEN1-213ENST00000555386 CDK17Q00537 523 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 DSG1Q02413 1049 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 HYAL1Q12794 435 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 MYO1EQ12965 1108 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 MTF1Q14872 753 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 CLUL1Q15846 466 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 ERCC6LQ2NKX8 1250 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 ZNF699Q32M78 642 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 ARHGAP29Q52LW3 1261 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 VARS2Q5ST30 1063 aaKnown RBP10.55□□□□□ -0.72
PSEN1-213ENST00000555386 KIAA0319Q5VV43 1072 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 WSCD1Q658N2 575 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 SPOPLQ6IQ16 392 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 FBXO38Q6PIJ6 1188 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 FRMD5Q7Z6J6 570 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 ZC3H3Q8IXZ2 948 aaKnown RBP10.55□□□□□ -0.72
PSEN1-213ENST00000555386 TMEM174Q8WUU8 243 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 PPP2R3CQ969Q6 453 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 BORCS6Q96GS4 357 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 SUSD3Q96L08 255 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 ERGIC2Q96RQ1 377 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 MKNK1Q9BUB5 465 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 APOL5Q9BWW9 433 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 EMILIN2Q9BXX0 1053 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 PRDM6Q9NQX0 595 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 CLDND1Q9NY35 253 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 LMCD1Q9NZU5 365 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 POLIQ9UNA4 740 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 MYH10P35580 1976 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 DOCK6Q96HP0 2047 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 MTCL1Q9Y4B5 1905 aaKnown RBP10.55□□□□□ -0.72
PSEN1-213ENST00000555386 TEX28O15482 410 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 ADAM12O43184 909 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 HUS1O60921 280 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 CLASP2O75122 1294 aaKnown RBP10.55□□□□□ -0.72
PSEN1-213ENST00000555386 LRRN2O75325 713 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 ODC1P11926 461 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 FGFR3P22607 806 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 OR1D2P34982 312 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 PNPLA4P41247 253 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 RAP1GAPP47736 663 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 MXI1P50539 228 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 AP3M2P53677 418 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 TNNC1P63316 161 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 YWHAHQ04917 246 aaPredicted RBP10.55□□□□□ -0.72
PSEN1-213ENST00000555386 MEA1Q16626 185 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 WDR72Q3MJ13 1102 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 ZACNQ401N2 412 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 CTXN3Q4LDR2 81 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 CBWD6Q4V339 395 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 CBWD3Q5JTY5 395 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 CBWD5Q5RIA9 395 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 FKBP15Q5T1M5 1219 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 PDE12Q6L8Q7 609 aaKnown RBP10.55□□□□□ -0.72
PSEN1-213ENST00000555386 METTL23Q86XA0 190 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 RNF168Q8IYW5 571 aaPredicted RBP10.55□□□□□ -0.72
PSEN1-213ENST00000555386 GPR161Q8N6U8 529 aaKnown RBP10.55□□□□□ -0.72
PSEN1-213ENST00000555386 APPL2Q8NEU8 664 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 CXorf38Q8TB03 319 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 LNX1Q8TBB1 728 aaPredicted RBP10.55□□□□□ -0.72
PSEN1-213ENST00000555386 TAS1R2Q8TE23 839 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 KLHL5Q96PQ7 755 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 TTYH3Q9C0H2 523 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 METTL14Q9HCE5 456 aaKnown RBP10.55□□□□□ -0.72
PSEN1-213ENST00000555386 TMEM8AQ9HCN3 771 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 CHST7Q9NS84 486 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 STXBP5LQ9Y2K9 1186 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.55□□□□□ -0.72
PSEN1-213ENST00000555386 CDY1Q9Y6F8 540 aa10.55□□□□□ -0.72
PSEN1-213ENST00000555386 TSC2P49815 1807 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 CTAGE9A4FU28 777 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 M0QZQ0 153 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 ATP8B1O43520 1251 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 NDUFA10O95299 355 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 GNA14O95837 355 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 EFEMP2O95967 443 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 OR4Q2P0C623 313 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 EPCAMP16422 314 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 ACAT1P24752 427 aaKnown RBP10.54□□□□□ -0.72
PSEN1-213ENST00000555386 NDUFV1P49821 464 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 KRT83P78385 493 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 ZBED6P86452 979 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 MYL7Q01449 175 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 KRT39Q6A163 491 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 OVOS1Q6IE37 1185 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 RSPO2Q6UXX9 243 aaPredicted RBP10.54□□□□□ -0.72
PSEN1-213ENST00000555386 ANKS3Q6ZW76 656 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 RSRC2Q7L4I2 434 aaKnown RBP10.54□□□□□ -0.72
PSEN1-213ENST00000555386 CCDC170Q8IYT3 715 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 EFCAB3Q8N7B9 438 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 LRRC52Q8N7C0 313 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 CEP112Q8N8E3 955 aa10.54□□□□□ -0.72
PSEN1-213ENST00000555386 PIK3R5Q8WYR1 880 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms