RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 DENND1BQ6P3S1 775 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 EPM2AIP1Q7L775 607 aaPredicted RBP12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 EDEM1Q92611 657 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 GAD1Q99259 594 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 CGRRF1Q99675 332 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 MAGEB2O15479 319 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 HSD17B3P37058 310 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 ITGA8P53708 1063 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 ITIH3Q06033 890 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 PPIL2Q13356 520 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 USP50Q70EL3 339 aaPredicted RBP12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 MCOLN2Q8IZK6 566 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 B3GNT5Q9BYG0 378 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 ZFYVE28Q9HCC9 887 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 TSR3Q9UJK0 312 aaKnown RBP12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 CHD4Q14839 1912 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 GPR25O00155 361 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 KCNN4O15554 427 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 RBP3P10745 1247 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 CCDC130P13994 396 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 OAZ1P54368 228 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 EIF3EP60228 445 aaKnown RBP12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 NIPA1Q7RTP0 329 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 SPATA18Q8TC71 538 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 EPS8L3Q8TE67 593 aaKnown RBP12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 MAIP1Q8WWC4 291 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 BRI3BPQ8WY22 251 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 MBOAT7Q96N66 472 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 ERP44Q9BS26 406 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 IP6K2Q9UHH9 426 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 XPOTO43592 962 aaKnown RBP12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 HCRTO43612 131 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 RECQL4O94761 1208 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 RFC1P35251 1148 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 GNL1P36915 607 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 OR1G1P47890 313 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 CDK17Q00537 523 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 MFSD14CQ5VZR4 134 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 PPM1NQ8N819 430 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 ANKS4BQ8N8V4 417 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 HNRNPLLQ8WVV9 542 aaKnown RBP12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 SLC13A1Q9BZW2 595 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 PRDM5Q9NQX1 630 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 RAB6BQ9NRW1 208 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 LRFN2Q9ULH4 789 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 FIS1Q9Y3D6 152 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 RASA4BC9J798 803 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 ACKR2O00590 384 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 TREHO43280 583 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 RASA4O43374 803 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 ZNF131P52739 623 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 MFSD7Q6UXD7 560 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 ENOSF1Q7L5Y1 443 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 VSIG1Q86XK7 387 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 EXOC8Q8IYI6 725 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 APPL2Q8NEU8 664 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 CCDC110Q8TBZ0 833 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 AGR3Q8TD06 166 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 ZNF516Q92618 1163 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 APOL2Q9BQE5 337 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 ABHD16BQ9H3Z7 469 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 SIX2Q9NPC8 291 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 MAP3K20Q9NYL2 800 aaKnown RBP12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 CHMP2BQ9UQN3 213 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 PPP2R3BQ9Y5P8 575 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 MYH8P13535 1937 aa12.86□□□□□ -0.35
ARHGEF40-206ENST00000555232 CPP00450 1065 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 CHRNA3P32297 505 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 NRLP54845 237 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 WNT7BP56706 349 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 CUL1Q13616 776 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 C4orf50Q6ZRC1 276 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 ARHGEF18Q6ZSZ5 1173 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 ARHGEF2Q92974 986 aaKnown RBP12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 RBM15Q96T37 977 aaKnown RBP eCLIP12.85□□□□□ -0.352e-6■■■□□ 17.2
ARHGEF40-206ENST00000555232 TSPAN16Q9UKR8 245 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 MAP1BP46821 2468 aaKnown RBP12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 BANF1O75531 89 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 GCKP35557 465 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 SLC39A4Q6P5W5 647 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 TAOK1Q7L7X3 1001 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 ABRAQ8N0Z2 381 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 DDX23Q9BUQ8 820 aaKnown RBP12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 STMN4Q9H169 189 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 APOBEC3GQ9HC16 384 aaKnown RBP12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 UVRAGQ9P2Y5 699 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 PPP1R12AO14974 1030 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 SYF2O95926 243 aaKnown RBP12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 INHBAP08476 426 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 ATP4AP20648 1035 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 HTRA3P83110 453 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 PTPN11Q06124 597 aaPredicted RBP12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 CLEC16AQ2KHT3 1053 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 ZACNQ401N2 412 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 TMC2Q8TDI7 906 aa12.85□□□□□ -0.35
ARHGEF40-206ENST00000555232 KAT6AQ92794 2004 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 CLDN5O00501 218 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 COILP38432 576 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 SEPT6Q14141 434 aa12.84□□□□□ -0.35
ARHGEF40-206ENST00000555232 SCARA3Q6AZY7 606 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms