RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 SURF1Q15526 300 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 LONRF1Q17RB8 773 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 MFSD7Q6UXD7 560 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 C11orf70Q9BRQ4 267 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 PPCSQ9HAB8 311 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.33□□□□□ -0.282e-6■■■■■ 149.1
PPP4R3A-206ENST00000554943 DDX56Q9NY93 547 aaKnown RBP13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 DNPEPQ9ULA0 475 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 PCDHB4Q9Y5E5 795 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 ACKR2O00590 384 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 CCNB1P14635 433 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 TSHRP16473 764 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 TCF7P36402 384 aaPredicted RBP13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 MAGEA6P43360 314 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 SLC26A2P50443 739 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 STAT5BP51692 787 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 VCPP55072 806 aaKnown RBP13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 MYL6P60660 151 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 C2CD6Q53TS8 623 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 TRABD2AQ86V40 505 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 EXOC8Q8IYI6 725 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 CACNA2D3Q8IZS8 1091 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 SLC7A3Q8WY07 619 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 SEPT1Q8WYJ6 367 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 C11orf84Q9BUA3 381 aaPredicted RBP13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 CTNNAL1Q9UBT7 734 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 GRID1Q9ULK0 1009 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 C22orf31O95567 290 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 IL1R2P27930 398 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 GPX6P59796 221 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 ATP13A4Q4VNC1 1196 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 TFDP3Q5H9I0 405 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 GPAT2Q6NUI2 795 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 MPZL3Q6UWV2 235 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 XYLT1Q86Y38 959 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 OTUD6BQ8N6M0 293 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 DEPTORQ8TB45 409 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 PWWP2AQ96N64 755 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 SLC40A1Q9NP59 571 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 SHOC2Q9UQ13 582 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 NAALADL1Q9UQQ1 740 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 F8VP50 259 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 LMNB2Q03252 620 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 ACAP1Q15027 740 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 PTPN20Q4JDL3 420 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 TAOK1Q7L7X3 1001 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 LIMS2Q7Z4I7 341 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 MAGEB18Q96M61 343 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 FNBP1Q96RU3 617 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 PCDH9Q9HC56 1237 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 NRBP2Q9NSY0 501 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 CLUHO75153 1309 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 ZNF487B1APH4 448 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 LRCH4O75427 683 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 PFKMP08237 780 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 TNNI1P19237 187 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 BAG6P46379 1132 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 BNIP1Q12981 228 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 MKRN3Q13064 507 aaKnown RBP13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 EFHC2Q5JST6 749 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 ICE2Q659A1 982 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 RNF43Q68DV7 783 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 TRNP1Q6NT89 227 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 TCP11Q8WWU5 503 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 MTMR12Q9C0I1 747 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 CENPHQ9H3R5 247 aa13.32□□□□□ -0.28
PPP4R3A-206ENST00000554943 THAP12O43422 761 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 GAS8O95995 478 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 ATF2P15336 505 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 WDR4P57081 412 aaKnown RBP13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 IFFO1Q0D2I5 559 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 CALCOCO2Q13137 446 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 FAM160B1Q5W0V3 765 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 BBS12Q6ZW61 710 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 SLC4A11Q8NBS3 891 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 C2orf40Q9H1Z8 148 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 GGA3Q9NZ52 723 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 ANAPC5Q9UJX4 755 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 TMEM120BA0PK00 339 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 CDH16O75309 829 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 CILPO75339 1184 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 TAC1P20366 129 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 KYNUQ16719 465 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 IZUMO3Q5VZ72 239 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 AFG1LQ8WV93 481 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 PLAC1Q9HBJ0 212 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 RBPJLQ9UBG7 517 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 AGAP1Q9UPQ3 857 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 PEX10O60683 326 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 FOXN2P32314 431 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 HSDL1Q3SXM5 330 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 PRAMEF18Q5VWM3 479 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 DENND1BQ6P3S1 775 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 CEP128Q6ZU80 1094 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 ARHGEF2Q92974 986 aaKnown RBP13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 MINDY3Q9H8M7 445 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 TXNRD2Q9NNW7 524 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 INTS9Q9NV88 658 aaKnown RBP13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 CAPN7Q9Y6W3 813 aa13.31□□□□□ -0.28
PPP4R3A-206ENST00000554943 IL1BP01584 269 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms