RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 GTF2IRD1Q9UHL9 959 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 NOCTQ9UK39 431 aaKnown RBP6.33□□□□□ -1.4
ATXN3-230ENST00000554673 TNFSF13BQ9Y275 285 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 FAN1Q9Y2M0 1017 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 NUB1Q9Y5A7 615 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 PCDHGC4Q9Y5F7 938 aa6.33□□□□□ -1.4
ATXN3-230ENST00000554673 A0A087X0T9 212 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 SMIM35A0A1B0GVV1 85 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 A0A1W2PQJ5 194 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 FAM221BA6H8Z2 402 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 F8W810 466 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 FOXN3O00409 490 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 CETN3O15182 167 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 ATXN7O15265 892 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 PMM2O15305 246 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 CALUO43852 315 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 EXTL3O43909 919 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 LCA5LO95447 670 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 AFPP02771 609 aaKnown RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 HMGCRP04035 888 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 C6orf222P0C671 652 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 FAM228BP0C875 321 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 CXCL8P10145 99 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 CYP2C9P11712 490 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 HARSP12081 509 aaKnown RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 UCHL3P15374 230 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 HSPA6P17066 643 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 ITGB8P26012 769 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 PSMC2P35998 433 aaKnown RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 PPP1R2P41236 205 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 SLC26A2P50443 739 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 CDK7P50613 346 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 PCBP4P57723 403 aaKnown RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 POLR2FP61218 127 aaKnown RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 CYP27A1Q02318 531 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 MAP2K1Q02750 393 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 POU5F1BQ06416 359 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 PRPF4BQ13523 1007 aaKnown RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 ZBTB6Q15916 424 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 CCDC40Q4G0X9 1142 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 DCAF17Q5H9S7 520 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 ARTNQ5T4W7 220 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 NXPE4Q6UWF7 544 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 ALKAL1Q6UXT8 129 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 ZPBP2Q6X784 338 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 SESTD1Q86VW0 696 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 CREBRFQ8IUR6 639 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 GPD1LQ8N335 351 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 METTL13Q8N6R0 699 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 POMGNT1Q8WZA1 660 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 CCDC127Q96BQ5 260 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 EAF1Q96JC9 268 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 PANX2Q96RD6 677 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 TWNKQ96RR1 684 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 CRISPLD1Q9H336 500 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 NXF3Q9H4D5 531 aaKnown RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 AZI2Q9H6S1 392 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 MMRN2Q9H8L6 949 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 ERVK-5Q9HDB9 667 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 XPNPEP3Q9NQH7 507 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 TRMT1Q9NXH9 659 aaKnown RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 DDX56Q9NY93 547 aaKnown RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 KLF15Q9UIH9 416 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 AGO2Q9UKV8 859 aaKnown RBP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 PTPN22Q9Y2R2 807 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 MSRB2Q9Y3D2 182 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATXN3-230ENST00000554673 DOCK6Q96HP0 2047 aa6.32□□□□□ -1.4
ATXN3-230ENST00000554673 OBSL1O75147 1896 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 PLXNA4Q9HCM2 1894 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 A0A1B0GUA9 196 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 A0A1W2PQ45 241 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-230ENST00000554673 A0A1W2PQY0 241 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 GTPBP10A4D1E9 387 aaKnown RBP6.31□□□□□ -1.4
ATXN3-230ENST00000554673 LACTBL1A8MY62 500 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 AKR1B15C9JRZ8 316 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-230ENST00000554673 F8VZ95 297 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 K7ERI5 159 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 PTGESO14684 152 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 HNRNPDLO14979 420 aaKnown RBP6.31□□□□□ -1.4
ATXN3-230ENST00000554673 KHNYNO15037 678 aaKnown RBP6.31□□□□□ -1.4
ATXN3-230ENST00000554673 TPD52L2O43399 206 aaKnown RBP6.31□□□□□ -1.4
ATXN3-230ENST00000554673 CBFA2T2O43439 604 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 DYRK3O43781 588 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 B4GALT4O60513 344 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 EXOC3O60645 756 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 CD4P01730 458 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 HLA-DRAP01903 254 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 EIF4A3P38919 411 aaKnown RBP6.31□□□□□ -1.4
ATXN3-230ENST00000554673 KCNJ6P48051 423 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 ZNF132P52740 706 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 ACLYP53396 1101 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 MYL6P60660 151 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 C1QTNF8P60827 252 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 OSTNP61366 133 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 MYL7Q01449 175 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 STIM1Q13586 685 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 ALCAMQ13740 583 aa6.31□□□□□ -1.4
ATXN3-230ENST00000554673 COL9A2Q14055 689 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-230ENST00000554673 LPIN1Q14693 890 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms