RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 STRN3Q13033 797 aa12.53□□□□□ -0.4
TUBB3-204ENST00000554116 LRRC32Q14392 662 aa12.53□□□□□ -0.4
TUBB3-204ENST00000554116 ARHGAP29Q52LW3 1261 aa12.53□□□□□ -0.4
TUBB3-204ENST00000554116 PLA2G2CQ5R387 149 aa12.53□□□□□ -0.4
TUBB3-204ENST00000554116 N4BP2L1Q5TBK1 243 aaPredicted RBP12.53□□□□□ -0.4
TUBB3-204ENST00000554116 C9orf57Q5W0N0 161 aa12.53□□□□□ -0.4
TUBB3-204ENST00000554116 JADE1Q6IE81 842 aa12.53□□□□□ -0.4
TUBB3-204ENST00000554116 FSTL4Q6MZW2 842 aa12.53□□□□□ -0.4
TUBB3-204ENST00000554116 HAUS6Q7Z4H7 955 aa12.53□□□□□ -0.4
TUBB3-204ENST00000554116 KBTBD6Q86V97 674 aa12.53□□□□□ -0.4
TUBB3-204ENST00000554116 YAF2Q8IY57 180 aa12.53□□□□□ -0.4
TUBB3-204ENST00000554116 EZH1Q92800 747 aaPredicted RBP12.53□□□□□ -0.4
TUBB3-204ENST00000554116 OXCT2Q9BYC2 517 aaPredicted RBP12.53□□□□□ -0.4
TUBB3-204ENST00000554116 ZCWPW1Q9H0M4 648 aa12.53□□□□□ -0.4
TUBB3-204ENST00000554116 IKZF4Q9H2S9 585 aa12.53□□□□□ -0.4
TUBB3-204ENST00000554116 ATXN3LQ9H3M9 355 aa12.53□□□□□ -0.4
TUBB3-204ENST00000554116 SMOC1Q9H4F8 434 aa12.53□□□□□ -0.4
TUBB3-204ENST00000554116 TASP1Q9H6P5 420 aa12.53□□□□□ -0.4
TUBB3-204ENST00000554116 CPSF3Q9UKF6 684 aaKnown RBP12.53□□□□□ -0.4
TUBB3-204ENST00000554116 ANAPC1Q9H1A4 1944 aa12.52□□□□□ -0.4
TUBB3-204ENST00000554116 LOC400499M0QZD8 3231 aa12.52□□□□□ -0.4
TUBB3-204ENST00000554116 VPS37CA5D8V6 355 aaPredicted RBP12.52□□□□□ -0.41
TUBB3-204ENST00000554116 TISP43B9A030 160 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 ANKRD63C9JTQ0 380 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 AXIN1O15169 862 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 OGTO15294 1046 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 NFICP08651 508 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 PLA2G4BP0C869 781 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 PDCP20941 246 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 ALDH1A3P47895 512 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 ZNF131P52739 623 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 LIMK1P53667 647 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 PLD1Q13393 1074 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 TMEM196Q5HYL7 178 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 TRIM68Q6AZZ1 485 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 C1orf228Q6PIY5 440 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 DSTYKQ6XUX3 929 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 BRAPQ7Z569 592 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 USP37Q86T82 979 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 SYNPOQ8N3V7 929 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 STKLD1Q8NE28 680 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 BPIFB1Q8TDL5 484 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 ARRDC1-AS1Q9H2J1 176 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 GKN1Q9NS71 199 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 BLOC1S4Q9NUP1 217 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 HSFX1Q9UBD0 423 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 TBX20Q9UMR3 447 aa12.52□□□□□ -0.41
TUBB3-204ENST00000554116 SMG1Q96Q15 3661 aaKnown RBP12.51□□□□□ -0.41
TUBB3-204ENST00000554116 PTPRDP23468 1912 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 NUP205Q92621 2012 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 VWA3AA6NCI4 1184 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 ANTXRLA6NF34 631 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 K7ELQ4 463 aaPredicted RBP12.51□□□□□ -0.41
TUBB3-204ENST00000554116 F11P03951 625 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 ZNF806P0C7X5 589 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 NMT1P30419 496 aaKnown RBP12.51□□□□□ -0.41
TUBB3-204ENST00000554116 SMTNP53814 917 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 WNT7BP56706 349 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 PPP2R3AQ06190 1150 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 ZRSR1Q15695 479 aaKnown RBP12.51□□□□□ -0.41
TUBB3-204ENST00000554116 ITPRIPL2Q3MIP1 535 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 AASDHQ4L235 1098 aaPredicted RBP12.51□□□□□ -0.41
TUBB3-204ENST00000554116 SLC39A12Q504Y0 691 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 ARL6IP4Q66PJ3 421 aaKnown RBP12.51□□□□□ -0.41
TUBB3-204ENST00000554116 GIPC2Q8TF65 315 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 GAB3Q8WWW8 586 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 USP13Q92995 863 aaPredicted RBP12.51□□□□□ -0.41
TUBB3-204ENST00000554116 INTS4Q96HW7 963 aaKnown RBP12.51□□□□□ -0.41
TUBB3-204ENST00000554116 REEP2Q9BRK0 252 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 TMLHEQ9NVH6 421 aa12.51□□□□□ -0.41
TUBB3-204ENST00000554116 RALYQ9UKM9 306 aaKnown RBP12.51□□□□□ -0.41
TUBB3-204ENST00000554116 CELSR3Q9NYQ7 3312 aa12.5□□□□□ -0.41
TUBB3-204ENST00000554116 FASNP49327 2511 aaKnown RBP12.5□□□□□ -0.41
TUBB3-204ENST00000554116 TRDMT1O14717 391 aaKnown RBP12.5□□□□□ -0.41
TUBB3-204ENST00000554116 TADA3O75528 432 aa12.5□□□□□ -0.41
TUBB3-204ENST00000554116 EPN2O95208 641 aa12.5□□□□□ -0.41
TUBB3-204ENST00000554116 EGFP01133 1207 aa12.5□□□□□ -0.41
TUBB3-204ENST00000554116 HAPLN1P10915 354 aaPredicted RBP12.5□□□□□ -0.41
TUBB3-204ENST00000554116 ARSAP15289 507 aa12.5□□□□□ -0.41
TUBB3-204ENST00000554116 SYT1P21579 422 aa12.5□□□□□ -0.41
TUBB3-204ENST00000554116 GRIN1Q05586 938 aa12.5□□□□□ -0.41
TUBB3-204ENST00000554116 COL9A2Q14055 689 aaPredicted RBP12.5□□□□□ -0.41
TUBB3-204ENST00000554116 CRELD2Q6UXH1 353 aaPredicted RBP12.5□□□□□ -0.41
TUBB3-204ENST00000554116 CMTM8Q8IZV2 173 aa12.5□□□□□ -0.41
TUBB3-204ENST00000554116 C12orf50Q8NA57 414 aaPredicted RBP12.5□□□□□ -0.41
TUBB3-204ENST00000554116 EBF3Q9H4W6 596 aa12.5□□□□□ -0.41
TUBB3-204ENST00000554116 RPF1Q9H9Y2 349 aaKnown RBP12.5□□□□□ -0.41
TUBB3-204ENST00000554116 KCND2Q9NZV8 630 aa12.5□□□□□ -0.41
TUBB3-204ENST00000554116 GON4LQ3T8J9 2241 aa12.5□□□□□ -0.41
TUBB3-204ENST00000554116 CCDC163A0A0D9SF12 145 aa12.49□□□□□ -0.41
TUBB3-204ENST00000554116 DPYSL4O14531 572 aa12.49□□□□□ -0.41
TUBB3-204ENST00000554116 BMP15O95972 392 aa12.49□□□□□ -0.41
TUBB3-204ENST00000554116 PROS1P07225 676 aa12.49□□□□□ -0.41
TUBB3-204ENST00000554116 ODC1P11926 461 aa12.49□□□□□ -0.41
TUBB3-204ENST00000554116 MATR3P43243 847 aaKnown RBP eCLIP12.49□□□□□ -0.41
TUBB3-204ENST00000554116 GPR15P49685 360 aa12.49□□□□□ -0.41
TUBB3-204ENST00000554116 ACOT2P49753 483 aa12.49□□□□□ -0.41
TUBB3-204ENST00000554116 LIG4P49917 911 aa12.49□□□□□ -0.41
TUBB3-204ENST00000554116 NLRP12P59046 1061 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms