RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 DUSP9Q99956 384 aaKnown RBP24.93■■□□□ 1.58
NEK9-203ENST00000553945 YIPF1Q9Y548 306 aa24.93■■□□□ 1.58
NEK9-203ENST00000553945 HCRTO43612 131 aa24.92■■□□□ 1.58
NEK9-203ENST00000553945 HLA-DRAP01903 254 aa24.92■■□□□ 1.58
NEK9-203ENST00000553945 WARSP23381 471 aaKnown RBP24.92■■□□□ 1.58
NEK9-203ENST00000553945 FSHRP23945 695 aa24.92■■□□□ 1.58
NEK9-203ENST00000553945 PCSK1P29120 753 aa24.92■■□□□ 1.58
NEK9-203ENST00000553945 SGSM1Q2NKQ1 1148 aa24.92■■□□□ 1.58
NEK9-203ENST00000553945 DCAF17Q5H9S7 520 aaPredicted RBP24.92■■□□□ 1.58
NEK9-203ENST00000553945 ZNF667Q5HYK9 610 aa24.92■■□□□ 1.58
NEK9-203ENST00000553945 GET4Q7L5D6 327 aaPredicted RBP24.92■■□□□ 1.58
NEK9-203ENST00000553945 OTOP3Q7RTS5 596 aa24.92■■□□□ 1.58
NEK9-203ENST00000553945 KHSRPQ92945 711 aaKnown RBP eCLIP24.92■■□□□ 1.58
NEK9-203ENST00000553945 CEP63Q96MT8 703 aa24.92■■□□□ 1.58
NEK9-203ENST00000553945 MRPL45Q9BRJ2 306 aaKnown RBP24.92■■□□□ 1.58
NEK9-203ENST00000553945 SNX25Q9H3E2 840 aa24.92■■□□□ 1.58
NEK9-203ENST00000553945 VRTNQ9H8Y1 702 aa24.92■■□□□ 1.58
NEK9-203ENST00000553945 DNMT3BQ9UBC3 853 aaKnown RBP24.92■■□□□ 1.58
NEK9-203ENST00000553945 STX10O60499 249 aa24.91■■□□□ 1.58
NEK9-203ENST00000553945 GBP2P32456 591 aaPredicted RBP24.91■■□□□ 1.58
NEK9-203ENST00000553945 ALDH1A3P47895 512 aa24.91■■□□□ 1.58
NEK9-203ENST00000553945 INTS6LQ5JSJ4 861 aaKnown RBP24.91■■□□□ 1.58
NEK9-203ENST00000553945 TCERG1LQ5VWI1 586 aa24.91■■□□□ 1.58
NEK9-203ENST00000553945 ELMOD1Q8N336 334 aa24.91■■□□□ 1.58
NEK9-203ENST00000553945 TTC9BQ8N6N2 239 aa24.91■■□□□ 1.58
NEK9-203ENST00000553945 TMEM8AQ9HCN3 771 aa24.91■■□□□ 1.58
NEK9-203ENST00000553945 TMLHEQ9NVH6 421 aa24.91■■□□□ 1.58
NEK9-203ENST00000553945 ABI2Q9NYB9 513 aaPredicted RBP24.91■■□□□ 1.58
NEK9-203ENST00000553945 ARMCX3Q9UH62 379 aaPredicted RBP24.91■■□□□ 1.58
NEK9-203ENST00000553945 CUL9Q8IWT3 2517 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 SOAT2O75908 522 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 PDGFRBP09619 1106 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 PTPN2P17706 415 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 LMO2P25791 158 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 GTF2H1P32780 548 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 SMARCB1Q12824 385 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 PLD1Q13393 1074 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 MGAT5BQ3V5L5 792 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 PABPC1LQ4VXU2 614 aaKnown RBP24.9■■□□□ 1.58
NEK9-203ENST00000553945 FOXR2Q6PJQ5 311 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 SCARA5Q6ZMJ2 495 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 FILIP1Q7Z7B0 1213 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 ZDHHC14Q8IZN3 488 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 PLCD3Q8N3E9 789 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 OR6B3Q8NGW1 331 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 SPPL2BQ8TCT7 592 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 TAS1R2Q8TE23 839 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 C2orf15Q8WU43 125 aaKnown RBP24.9■■□□□ 1.58
NEK9-203ENST00000553945 ZNF512Q96ME7 567 aaPredicted RBP24.9■■□□□ 1.58
NEK9-203ENST00000553945 SEPT5Q99719 369 aaPredicted RBP24.9■■□□□ 1.58
NEK9-203ENST00000553945 CORO1BQ9BR76 489 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.9■■□□□ 1.58
NEK9-203ENST00000553945 GTF3C4Q9UKN8 822 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 PCDHB5Q9Y5E4 795 aa24.9■■□□□ 1.58
NEK9-203ENST00000553945 ATP2C2O75185 946 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 TACC1O75410 805 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 P4HA1P13674 534 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 GNL1P36915 607 aaPredicted RBP24.89■■□□□ 1.58
NEK9-203ENST00000553945 EPHB3P54753 998 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 MCCD1P59942 119 aaPredicted RBP24.89■■□□□ 1.58
NEK9-203ENST00000553945 NFE2Q16621 373 aaPredicted RBP24.89■■□□□ 1.58
NEK9-203ENST00000553945 CCDC40Q4G0X9 1142 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 KRT39Q6A163 491 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 IQCEQ6IPM2 695 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 SPOPLQ6IQ16 392 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 MLKLQ8NB16 471 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 TAF4BQ92750 862 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 MYADMQ96S97 322 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 SYT15Q9BQS2 421 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 PI4K2AQ9BTU6 479 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 IMPG2Q9BZV3 1241 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 SMYD3Q9H7B4 428 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 CEP72Q9P209 647 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 HSFX1Q9UBD0 423 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 MUTYHQ9UIF7 546 aa24.89■■□□□ 1.58
NEK9-203ENST00000553945 DOCK6Q96HP0 2047 aa24.89■■□□□ 1.57
NEK9-203ENST00000553945 N4BP1O75113 896 aaKnown RBP24.88■■□□□ 1.57
NEK9-203ENST00000553945 ASS1P00966 412 aaKnown RBP24.88■■□□□ 1.57
NEK9-203ENST00000553945 RHOP08100 348 aa24.88■■□□□ 1.57
NEK9-203ENST00000553945 FAM163BP0C2L3 166 aa24.88■■□□□ 1.57
NEK9-203ENST00000553945 RAP1GAPP47736 663 aa24.88■■□□□ 1.57
NEK9-203ENST00000553945 TUFMP49411 452 aaKnown RBP24.88■■□□□ 1.57
NEK9-203ENST00000553945 MXI1P50539 228 aa24.88■■□□□ 1.57
NEK9-203ENST00000553945 CDH8P55286 799 aa24.88■■□□□ 1.57
NEK9-203ENST00000553945 PSMC1P62191 440 aaKnown RBP24.88■■□□□ 1.57
NEK9-203ENST00000553945 CCDC142Q17RM4 750 aa24.88■■□□□ 1.57
NEK9-203ENST00000553945 PKMYT1Q99640 499 aa24.88■■□□□ 1.57
NEK9-203ENST00000553945 METTL14Q9HCE5 456 aaKnown RBP24.88■■□□□ 1.57
NEK9-203ENST00000553945 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.88■■□□□ 1.57
NEK9-203ENST00000553945 LIMD1Q9UGP4 676 aa24.88■■□□□ 1.57
NEK9-203ENST00000553945 CDH9Q9ULB4 789 aa24.88■■□□□ 1.57
NEK9-203ENST00000553945 NCOR1O75376 2440 aa24.87■■□□□ 1.57
NEK9-203ENST00000553945 MYBPHLA2RUH7 354 aa24.87■■□□□ 1.57
NEK9-203ENST00000553945 FRMD5Q7Z6J6 570 aa24.87■■□□□ 1.57
NEK9-203ENST00000553945 ITFG1Q8TB96 612 aa24.87■■□□□ 1.57
NEK9-203ENST00000553945 SRRTQ9BXP5 876 aaKnown RBP24.87■■□□□ 1.57
NEK9-203ENST00000553945 RWDD2AQ9UIY3 292 aa24.87■■□□□ 1.57
NEK9-203ENST00000553945 MRPS23Q9Y3D9 190 aaKnown RBP24.87■■□□□ 1.57
NEK9-203ENST00000553945 A8MXQ7 604 aa24.86■■□□□ 1.57
NEK9-203ENST00000553945 HAPLN1P10915 354 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms