RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 WARSP23381 471 aaKnown RBP24.43■■□□□ 1.5
TDP1-206ENST00000553569 RAP1GAPP47736 663 aa24.43■■□□□ 1.5
TDP1-206ENST00000553569 DUSP4Q13115 394 aa24.43■■□□□ 1.5
TDP1-206ENST00000553569 SGSM1Q2NKQ1 1148 aa24.43■■□□□ 1.5
TDP1-206ENST00000553569 INTS6LQ5JSJ4 861 aaKnown RBP24.43■■□□□ 1.5
TDP1-206ENST00000553569 CCDC183Q5T5S1 534 aa24.43■■□□□ 1.5
TDP1-206ENST00000553569 GRASPQ7Z6J2 395 aaPredicted RBP24.43■■□□□ 1.5
TDP1-206ENST00000553569 FRMD5Q7Z6J6 570 aa24.43■■□□□ 1.5
TDP1-206ENST00000553569 DCP1BQ8IZD4 617 aaKnown RBP24.43■■□□□ 1.5
TDP1-206ENST00000553569 TTC9BQ8N6N2 239 aa24.43■■□□□ 1.5
TDP1-206ENST00000553569 ACBD6Q9BR61 282 aa24.43■■□□□ 1.5
TDP1-206ENST00000553569 RHOBTB2Q9BYZ6 727 aa24.43■■□□□ 1.5
TDP1-206ENST00000553569 SNX25Q9H3E2 840 aa24.43■■□□□ 1.5
TDP1-206ENST00000553569 ABI2Q9NYB9 513 aaPredicted RBP24.43■■□□□ 1.5
TDP1-206ENST00000553569 MAFFQ9ULX9 164 aa24.43■■□□□ 1.5
TDP1-206ENST00000553569 SLC27A5Q9Y2P5 690 aa24.43■■□□□ 1.5
TDP1-206ENST00000553569 YIPF1Q9Y548 306 aa24.43■■□□□ 1.5
TDP1-206ENST00000553569 DOCK6Q96HP0 2047 aa24.43■■□□□ 1.5
TDP1-206ENST00000553569 PAPLNO95428 1278 aa24.42■■□□□ 1.5
TDP1-206ENST00000553569 ASS1P00966 412 aaKnown RBP24.42■■□□□ 1.5
TDP1-206ENST00000553569 LMO2P25791 158 aa24.42■■□□□ 1.5
TDP1-206ENST00000553569 PCSK1P29120 753 aa24.42■■□□□ 1.5
TDP1-206ENST00000553569 PSMC1P62191 440 aaKnown RBP24.42■■□□□ 1.5
TDP1-206ENST00000553569 NTHL1P78549 312 aa24.42■■□□□ 1.5
TDP1-206ENST00000553569 TWF1Q12792 350 aa24.42■■□□□ 1.5
TDP1-206ENST00000553569 CCDC142Q17RM4 750 aa24.42■■□□□ 1.5
TDP1-206ENST00000553569 RTL10Q7L3V2 364 aa24.42■■□□□ 1.5
TDP1-206ENST00000553569 OR6B3Q8NGW1 331 aa24.42■■□□□ 1.5
TDP1-206ENST00000553569 TAF4BQ92750 862 aa24.42■■□□□ 1.5
TDP1-206ENST00000553569 SYT15Q9BQS2 421 aa24.42■■□□□ 1.5
TDP1-206ENST00000553569 CD320Q9NPF0 282 aa24.42■■□□□ 1.5
TDP1-206ENST00000553569 TMLHEQ9NVH6 421 aa24.42■■□□□ 1.5
TDP1-206ENST00000553569 HCFC1R1Q9NWW0 138 aa24.42■■□□□ 1.5
TDP1-206ENST00000553569 DACH1Q9UI36 760 aa24.42■■□□□ 1.5
TDP1-206ENST00000553569 C5orf42Q9H799 3197 aa24.42■■□□□ 1.5
TDP1-206ENST00000553569 TACC1O75410 805 aa24.41■■□□□ 1.5
TDP1-206ENST00000553569 FGFR1OPO95684 399 aaKnown RBP24.41■■□□□ 1.5
TDP1-206ENST00000553569 PDGFRBP09619 1106 aa24.41■■□□□ 1.5
TDP1-206ENST00000553569 P4HA1P13674 534 aa24.41■■□□□ 1.5
TDP1-206ENST00000553569 CDH8P55286 799 aa24.41■■□□□ 1.5
TDP1-206ENST00000553569 MCCD1P59942 119 aaPredicted RBP24.41■■□□□ 1.5
TDP1-206ENST00000553569 NOP14P78316 857 aaKnown RBP24.41■■□□□ 1.5
TDP1-206ENST00000553569 CBWD6Q4V339 395 aa24.41■■□□□ 1.5
TDP1-206ENST00000553569 CBWD3Q5JTY5 395 aa24.41■■□□□ 1.5
TDP1-206ENST00000553569 CBWD5Q5RIA9 395 aa24.41■■□□□ 1.5
TDP1-206ENST00000553569 RBM43Q6ZSC3 357 aaKnown RBP24.41■■□□□ 1.5
TDP1-206ENST00000553569 GJD3Q8N144 294 aa24.41■■□□□ 1.5
TDP1-206ENST00000553569 SLC35C1Q96A29 364 aa24.41■■□□□ 1.5
TDP1-206ENST00000553569 MED15Q96RN5 788 aa24.41■■□□□ 1.5
TDP1-206ENST00000553569 SEPT5Q99719 369 aaPredicted RBP24.41■■□□□ 1.5
TDP1-206ENST00000553569 WDR6Q9NNW5 1121 aaKnown RBP24.41■■□□□ 1.5
TDP1-206ENST00000553569 LRRN2O75325 713 aa24.4■■□□□ 1.5
TDP1-206ENST00000553569 SOAT2O75908 522 aa24.4■■□□□ 1.5
TDP1-206ENST00000553569 POU2F2P09086 479 aa24.4■■□□□ 1.5
TDP1-206ENST00000553569 TPD52L1Q16890 204 aaPredicted RBP24.4■■□□□ 1.5
TDP1-206ENST00000553569 MGAT5BQ3V5L5 792 aa24.4■■□□□ 1.5
TDP1-206ENST00000553569 CCDC150Q8NCX0 1101 aa24.4■■□□□ 1.5
TDP1-206ENST00000553569 FBXL13Q8NEE6 735 aa24.4■■□□□ 1.5
TDP1-206ENST00000553569 SEMA4DQ92854 862 aa24.4■■□□□ 1.5
TDP1-206ENST00000553569 SDCBP2Q9H190 292 aa24.4■■□□□ 1.5
TDP1-206ENST00000553569 APOBEC3GQ9HC16 384 aaKnown RBP24.4■■□□□ 1.5
TDP1-206ENST00000553569 GTF3C4Q9UKN8 822 aa24.4■■□□□ 1.5
TDP1-206ENST00000553569 CDH9Q9ULB4 789 aa24.4■■□□□ 1.5
TDP1-206ENST00000553569 NR2E1Q9Y466 385 aa24.4■■□□□ 1.5
TDP1-206ENST00000553569 PCDHB5Q9Y5E4 795 aa24.4■■□□□ 1.5
TDP1-206ENST00000553569 VCANP13611 3396 aa24.39■■□□□ 1.5
TDP1-206ENST00000553569 C19orf67A6NJJ6 358 aa24.39■■□□□ 1.49
TDP1-206ENST00000553569 C2CD4DB7Z1M9 353 aa24.39■■□□□ 1.49
TDP1-206ENST00000553569 LOC730098B7Z3J9 87 aa24.39■■□□□ 1.49
TDP1-206ENST00000553569 ATP2C2O75185 946 aa24.39■■□□□ 1.49
TDP1-206ENST00000553569 GNA14O95837 355 aa24.39■■□□□ 1.49
TDP1-206ENST00000553569 GNL1P36915 607 aaPredicted RBP24.39■■□□□ 1.49
TDP1-206ENST00000553569 SMARCB1Q12824 385 aa24.39■■□□□ 1.49
TDP1-206ENST00000553569 NFE2Q16621 373 aaPredicted RBP24.39■■□□□ 1.49
TDP1-206ENST00000553569 GET4Q7L5D6 327 aaPredicted RBP24.39■■□□□ 1.49
TDP1-206ENST00000553569 CREBRFQ8IUR6 639 aa24.39■■□□□ 1.49
TDP1-206ENST00000553569 ELMOD1Q8N336 334 aa24.39■■□□□ 1.49
TDP1-206ENST00000553569 TDRD5Q8NAT2 981 aaKnown RBP24.39■■□□□ 1.49
TDP1-206ENST00000553569 SPPL2BQ8TCT7 592 aa24.39■■□□□ 1.49
TDP1-206ENST00000553569 C2orf15Q8WU43 125 aaKnown RBP24.39■■□□□ 1.49
TDP1-206ENST00000553569 PKMYT1Q99640 499 aa24.39■■□□□ 1.49
TDP1-206ENST00000553569 TMEM63CQ9P1W3 806 aa24.39■■□□□ 1.49
TDP1-206ENST00000553569 NME7Q9Y5B8 376 aa24.39■■□□□ 1.49
TDP1-206ENST00000553569 MYBPHLA2RUH7 354 aa24.38■■□□□ 1.49
TDP1-206ENST00000553569 A8MXQ7 604 aa24.38■■□□□ 1.49
TDP1-206ENST00000553569 DLL1O00548 723 aa24.38■■□□□ 1.49
TDP1-206ENST00000553569 CCDC192P0DO97 292 aa24.38■■□□□ 1.49
TDP1-206ENST00000553569 ASPAP45381 313 aa24.38■■□□□ 1.49
TDP1-206ENST00000553569 ALDH1A3P47895 512 aa24.38■■□□□ 1.49
TDP1-206ENST00000553569 PLD1Q13393 1074 aa24.38■■□□□ 1.49
TDP1-206ENST00000553569 SASS6Q6UVJ0 657 aa24.38■■□□□ 1.49
TDP1-206ENST00000553569 CNOT6LQ96LI5 555 aaKnown RBP24.38■■□□□ 1.49
TDP1-206ENST00000553569 CORO1BQ9BR76 489 aa24.38■■□□□ 1.49
TDP1-206ENST00000553569 DPEP3Q9H4B8 488 aa24.38■■□□□ 1.49
TDP1-206ENST00000553569 CRTAC1Q9NQ79 661 aa24.38■■□□□ 1.49
TDP1-206ENST00000553569 RAB20Q9NX57 234 aa24.38■■□□□ 1.49
TDP1-206ENST00000553569 DNMT3BQ9UBC3 853 aaKnown RBP24.38■■□□□ 1.49
TDP1-206ENST00000553569 FAM163BP0C2L3 166 aa24.37■■□□□ 1.49
TDP1-206ENST00000553569 FSHRP23945 695 aa24.37■■□□□ 1.49
TDP1-206ENST00000553569 FMO5P49326 533 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms