RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 PLD1Q13393 1074 aa25.32■■□□□ 1.64
TDP1-205ENST00000553527 BIRC3Q13489 604 aa25.32■■□□□ 1.64
TDP1-205ENST00000553527 OSTM1Q86WC4 334 aa25.32■■□□□ 1.64
TDP1-205ENST00000553527 TMEM86AQ8N2M4 240 aa25.32■■□□□ 1.64
TDP1-205ENST00000553527 TOP6BLQ8N6T0 577 aa25.32■■□□□ 1.64
TDP1-205ENST00000553527 SPATA20Q8TB22 786 aa25.32■■□□□ 1.64
TDP1-205ENST00000553527 PARD3BQ8TEW8 1205 aa25.32■■□□□ 1.64
TDP1-205ENST00000553527 FGF14Q92915 247 aa25.32■■□□□ 1.64
TDP1-205ENST00000553527 ASAH2Q9NR71 780 aa25.32■■□□□ 1.64
TDP1-205ENST00000553527 TMLHEQ9NVH6 421 aa25.32■■□□□ 1.64
TDP1-205ENST00000553527 FRMD4BQ9Y2L6 1034 aa25.32■■□□□ 1.64
TDP1-205ENST00000553527 LRRIQ3A6PVS8 624 aaPredicted RBP25.31■■□□□ 1.64
TDP1-205ENST00000553527 ZNF197O14709 1029 aa25.31■■□□□ 1.64
TDP1-205ENST00000553527 CFHP08603 1231 aa25.31■■□□□ 1.64
TDP1-205ENST00000553527 CCR2P41597 374 aa25.31■■□□□ 1.64
TDP1-205ENST00000553527 DLG4P78352 724 aa25.31■■□□□ 1.64
TDP1-205ENST00000553527 HTR4Q13639 388 aa25.31■■□□□ 1.64
TDP1-205ENST00000553527 GUF1Q8N442 669 aaKnown RBP25.31■■□□□ 1.64
TDP1-205ENST00000553527 NXPE3Q969Y0 559 aa25.31■■□□□ 1.64
TDP1-205ENST00000553527 DNAJC25Q9H1X3 360 aa25.31■■□□□ 1.64
TDP1-205ENST00000553527 FBXL21Q9UKT6 434 aa25.31■■□□□ 1.64
TDP1-205ENST00000553527 DUSP12Q9UNI6 340 aa25.31■■□□□ 1.64
TDP1-205ENST00000553527 TRAF3IP3Q9Y228 551 aa25.31■■□□□ 1.64
TDP1-205ENST00000553527 HCN4Q9Y3Q4 1203 aa25.31■■□□□ 1.64
TDP1-205ENST00000553527 ANHXE9PGG2 379 aa25.3■■□□□ 1.64
TDP1-205ENST00000553527 NRG2O14511 850 aaPredicted RBP25.3■■□□□ 1.64
TDP1-205ENST00000553527 NR2F2P24468 414 aa25.3■■□□□ 1.64
TDP1-205ENST00000553527 LHX1P48742 406 aa25.3■■□□□ 1.64
TDP1-205ENST00000553527 TUFMP49411 452 aaKnown RBP25.3■■□□□ 1.64
TDP1-205ENST00000553527 MYL6P60660 151 aa25.3■■□□□ 1.64
TDP1-205ENST00000553527 PRSS36Q5K4E3 855 aa25.3■■□□□ 1.64
TDP1-205ENST00000553527 ISM2Q6H9L7 571 aa25.3■■□□□ 1.64
TDP1-205ENST00000553527 BMP8AQ7Z5Y6 402 aa25.3■■□□□ 1.64
TDP1-205ENST00000553527 SUGP1Q8IWZ8 645 aaKnown RBP25.3■■□□□ 1.64
TDP1-205ENST00000553527 GIPC2Q8TF65 315 aa25.3■■□□□ 1.64
TDP1-205ENST00000553527 LPIN3Q9BQK8 851 aa25.3■■□□□ 1.64
TDP1-205ENST00000553527 ACBD6Q9BR61 282 aa25.3■■□□□ 1.64
TDP1-205ENST00000553527 PI4K2AQ9BTU6 479 aa25.3■■□□□ 1.64
TDP1-205ENST00000553527 AVENQ9NQS1 362 aaPredicted RBP25.3■■□□□ 1.64
TDP1-205ENST00000553527 NXF1Q9UBU9 619 aaKnown RBP25.3■■□□□ 1.64
TDP1-205ENST00000553527 GTF3C4Q9UKN8 822 aa25.3■■□□□ 1.64
TDP1-205ENST00000553527 PCDHB5Q9Y5E4 795 aa25.3■■□□□ 1.64
TDP1-205ENST00000553527 PDGFRBP09619 1106 aa25.29■■□□□ 1.64
TDP1-205ENST00000553527 WDR72Q3MJ13 1102 aa25.29■■□□□ 1.64
TDP1-205ENST00000553527 POTEHQ6S545 545 aa25.29■■□□□ 1.64
TDP1-205ENST00000553527 MTSS1LQ765P7 747 aa25.29■■□□□ 1.64
TDP1-205ENST00000553527 DNAJB7Q7Z6W7 309 aaPredicted RBP25.29■■□□□ 1.64
TDP1-205ENST00000553527 SPPL2BQ8TCT7 592 aa25.29■■□□□ 1.64
TDP1-205ENST00000553527 GPR152Q8TDT2 470 aa25.29■■□□□ 1.64
TDP1-205ENST00000553527 ELMO3Q96BJ8 720 aa25.29■■□□□ 1.64
TDP1-205ENST00000553527 KXD1Q9BQD3 176 aa25.29■■□□□ 1.64
TDP1-205ENST00000553527 KIAA1468Q9P260 1216 aa25.29■■□□□ 1.64
TDP1-205ENST00000553527 MAN1B1Q9UKM7 699 aa25.29■■□□□ 1.64
TDP1-205ENST00000553527 LMO2P25791 158 aa25.28■■□□□ 1.64
TDP1-205ENST00000553527 TNNC1P63316 161 aa25.28■■□□□ 1.64
TDP1-205ENST00000553527 SMARCB1Q12824 385 aa25.28■■□□□ 1.64
TDP1-205ENST00000553527 ADAM9Q13443 819 aa25.28■■□□□ 1.64
TDP1-205ENST00000553527 TAF12Q16514 161 aa25.28■■□□□ 1.64
TDP1-205ENST00000553527 TDRD10Q5VZ19 366 aaKnown RBP25.28■■□□□ 1.64
TDP1-205ENST00000553527 DPH6Q7L8W6 267 aa25.28■■□□□ 1.64
TDP1-205ENST00000553527 FBXL6Q8N531 539 aa25.28■■□□□ 1.64
TDP1-205ENST00000553527 C2orf15Q8WU43 125 aaKnown RBP25.28■■□□□ 1.64
TDP1-205ENST00000553527 EEF2KMTQ96G04 330 aa25.28■■□□□ 1.64
TDP1-205ENST00000553527 GTPBP4Q9BZE4 634 aaKnown RBP25.28■■□□□ 1.64
TDP1-205ENST00000553527 MFSD1Q9H3U5 465 aa25.28■■□□□ 1.64
TDP1-205ENST00000553527 GABRDO14764 452 aa25.27■■□□□ 1.64
TDP1-205ENST00000553527 ATP2C2O75185 946 aa25.27■■□□□ 1.64
TDP1-205ENST00000553527 C4BPAP04003 597 aaKnown RBP25.27■■□□□ 1.64
TDP1-205ENST00000553527 HAPLN1P10915 354 aaPredicted RBP25.27■■□□□ 1.64
TDP1-205ENST00000553527 RPL13P26373 211 aaKnown RBP25.27■■□□□ 1.64
TDP1-205ENST00000553527 PRCPP42785 496 aa25.27■■□□□ 1.64
TDP1-205ENST00000553527 PSMC1P62191 440 aaKnown RBP25.27■■□□□ 1.64
TDP1-205ENST00000553527 VEPH1Q14D04 833 aa25.27■■□□□ 1.64
TDP1-205ENST00000553527 TEAD2Q15562 447 aa25.27■■□□□ 1.64
TDP1-205ENST00000553527 NFE2Q16621 373 aaPredicted RBP25.27■■□□□ 1.64
TDP1-205ENST00000553527 CCDC142Q17RM4 750 aa25.27■■□□□ 1.64
TDP1-205ENST00000553527 INTS6LQ5JSJ4 861 aaKnown RBP25.27■■□□□ 1.64
TDP1-205ENST00000553527 CCDC183Q5T5S1 534 aa25.27■■□□□ 1.64
TDP1-205ENST00000553527 ZNF658Q5TYW1 1059 aaPredicted RBP25.27■■□□□ 1.64
TDP1-205ENST00000553527 TMEM174Q8WUU8 243 aa25.27■■□□□ 1.64
TDP1-205ENST00000553527 KBTBD7Q8WVZ9 684 aa25.27■■□□□ 1.64
TDP1-205ENST00000553527 ZSWIM3Q96MP5 696 aa25.27■■□□□ 1.64
TDP1-205ENST00000553527 MRPL45Q9BRJ2 306 aaKnown RBP25.27■■□□□ 1.64
TDP1-205ENST00000553527 SNX25Q9H3E2 840 aa25.27■■□□□ 1.64
TDP1-205ENST00000553527 SLITRK6Q9H5Y7 841 aa25.27■■□□□ 1.64
TDP1-205ENST00000553527 GDE1Q9NZC3 331 aa25.27■■□□□ 1.64
TDP1-205ENST00000553527 HSFX1Q9UBD0 423 aa25.27■■□□□ 1.64
TDP1-205ENST00000553527 A0A1W2PRU2 124 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 MYBPHLA2RUH7 354 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 BIN1O00499 593 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 MOSPD3O75425 235 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 AKAP3O75969 853 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 SRFP11831 508 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 ATF6P18850 670 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 PCSK1P29120 753 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 VAMP7P51809 220 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 AP3M2P53677 418 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 KLHL40Q2TBA0 621 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 ITIH5Q86UX2 942 aa25.26■■□□□ 1.63
TDP1-205ENST00000553527 LEMD2Q8NC56 503 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms