RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 LCLAT1Q6UWP7 414 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 ADAT2Q7Z6V5 191 aaKnown RBP9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 RPAINQ86UA6 219 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 DDX42Q86XP3 938 aaKnown RBP eCLIP9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 RCOR2Q8IZ40 523 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 LRRC52Q8N7C0 313 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 C7orf31Q8N865 590 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 SMG8Q8ND04 991 aaKnown RBP9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 C3orf20Q8ND61 904 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 KLHDC9Q8NEP7 349 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 BEST2Q8NFU1 509 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 EXD1Q8NHP7 514 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 FAM71BQ8TC56 605 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 PIK3R5Q8WYR1 880 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 TRIB2Q92519 343 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 C18orf8Q96DM3 657 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 MCRS1Q96EZ8 462 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 HEXIM2Q96MH2 286 aaKnown RBP9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 RUNDC3BQ96NL0 473 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 NEUROG2Q9H2A3 272 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 MED4Q9NPJ6 270 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 MTUS1Q9ULD2 1270 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 UBQLN1Q9UMX0 589 aaKnown RBP9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 GINS2Q9Y248 185 aa9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.94□□□□□ -0.82
MTHFD1-203ENST00000553391 TRPM7Q96QT4 1865 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 O00370 1275 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 KIF3CO14782 793 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 PPEF2O14830 753 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 SEPT4O43236 478 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 CD4P01730 458 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 FNTAP49354 379 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 FLT3LGP49771 235 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 NDST1P52848 882 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 DR1Q01658 176 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 CACNB2Q08289 660 aaPredicted RBP9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 ZNF252P-AS1Q0IIN9 211 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 MYO1EQ12965 1108 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 PIGHQ14442 188 aaPredicted RBP9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 STILQ15468 1287 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 PTPN20Q4JDL3 420 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 PKDCCQ504Y2 493 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 CCSAPQ6IQ19 270 aaPredicted RBP9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 DNAJC24Q6P3W2 148 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 SESTD1Q86VW0 696 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 UNC93AQ86WB7 457 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 JAMLQ86YT9 394 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 CRYBG2Q8N1P7 616 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 NIPA2Q8N8Q9 360 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 FNIP1Q8TF40 1166 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 SLCO2A1Q92959 643 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 C18orf25Q96B23 403 aaPredicted RBP9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 SH3GL2Q99962 352 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 MRPL45Q9BRJ2 306 aaKnown RBP9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 HERPUD2Q9BSE4 406 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 PLVAPQ9BX97 442 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 NT5C1AQ9BXI3 368 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 RAB17Q9H0T7 212 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 HMGXB4Q9UGU5 601 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 GTF2IRD1Q9UHL9 959 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 STRIP2Q9ULQ0 834 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 UTP11Q9Y3A2 253 aaKnown RBP9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 HES2Q9Y543 173 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 CEP83Q9Y592 693 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 NME7Q9Y5B8 376 aa9.93□□□□□ -0.82
MTHFD1-203ENST00000553391 F8VP50 259 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 POLR3GO15318 223 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 ADAMTS4O75173 837 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 RECQL4O94761 1208 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 PFKMP08237 780 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 C6orf222P0C671 652 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 KRT3P12035 628 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 AKAP5P24588 427 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 RFC1P35251 1148 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 GGCXP38435 758 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 PSMC1P62191 440 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 MRPS6P82932 125 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 CAP1Q01518 475 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 TRIM32Q13049 653 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 KLF1Q13351 362 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 ORC1Q13415 861 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 CCNG2Q16589 344 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 ATP13A4Q4VNC1 1196 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 SGO2Q562F6 1265 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 ARHGAP17Q68EM7 881 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 GDF6Q6KF10 455 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 DCUN1D2Q6PH85 259 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 CCDC137Q6PK04 289 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 ZDHHC24Q6UX98 284 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 ANKS1BQ7Z6G8 1248 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 MRPL10Q7Z7H8 261 aaKnown RBP9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 FAM228AQ86W67 206 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 XYLT1Q86Y38 959 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 REM2Q8IYK8 340 aaPredicted RBP9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 ARFGAP1Q8N6T3 406 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 ARRDC4Q8NCT1 418 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 SMC1BQ8NDV3 1235 aa9.92□□□□□ -0.82
MTHFD1-203ENST00000553391 ATL2Q8NHH9 583 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms