RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 ACACBO00763 2458 aa10.14□□□□□ -0.79
CHD8-203ENST00000553283 PDCD11Q14690 1871 aaKnown RBP10.13□□□□□ -0.79
CHD8-203ENST00000553283 DNAH14Q0VDD8 3507 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 DCDC2BA2VCK2 349 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 KPNA7A9QM74 516 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 PRAMEF12O95522 483 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 HAPLN1P10915 354 aaPredicted RBP10.13□□□□□ -0.79
CHD8-203ENST00000553283 MCM2P49736 904 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 CDR1P51861 262 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 CYP4F8P98187 520 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 TNK2Q07912 1038 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 CCINQ13939 588 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 POSTNQ15063 836 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 PON2Q15165 354 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 SF3A1Q15459 793 aaKnown RBP10.13□□□□□ -0.79
CHD8-203ENST00000553283 TAF12Q16514 161 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 ITPRIPL2Q3MIP1 535 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 WSCD1Q658N2 575 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 CRELD2Q6UXH1 353 aaPredicted RBP10.13□□□□□ -0.79
CHD8-203ENST00000553283 Q6ZS52 159 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 BRAPQ7Z569 592 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 DCP1BQ8IZD4 617 aaKnown RBP10.13□□□□□ -0.79
CHD8-203ENST00000553283 KRI1Q8N9T8 703 aaKnown RBP10.13□□□□□ -0.79
CHD8-203ENST00000553283 SPPL2BQ8TCT7 592 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 GIPC2Q8TF65 315 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 GCNAQ96QF7 691 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 C2orf42Q9NWW7 574 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 ZMYM5Q9UJ78 669 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.13□□□□□ -0.79
CHD8-203ENST00000553283 COL4A2P08572 1712 aa10.13□□□□□ -0.79
CHD8-203ENST00000553283 MYH11P35749 1972 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 SOBPA7XYQ1 873 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 IL18RAPO95256 599 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 F11P03951 625 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 ADSSP30520 456 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 SRSF5Q13243 272 aaKnown RBP10.12□□□□□ -0.79
CHD8-203ENST00000553283 PTPAQ15257 358 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 HEATR6Q6AI08 1181 aaKnown RBP10.12□□□□□ -0.79
CHD8-203ENST00000553283 USP49Q70CQ1 688 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 TMEM150AQ86TG1 271 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 NT5DC4Q86YG4 428 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 CMTM8Q8IZV2 173 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 NETO1Q8TDF5 533 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 POMGNT1Q8WZA1 660 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 EPSTI1Q96J88 318 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 FAM83CQ9BQN1 747 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 STRA6Q9BX79 667 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 SMG9Q9H0W8 520 aaKnown RBP10.12□□□□□ -0.79
CHD8-203ENST00000553283 IKZF4Q9H2S9 585 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 GKN1Q9NS71 199 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 SEMA4GQ9NTN9 838 aa10.12□□□□□ -0.79
CHD8-203ENST00000553283 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.12□□□□□ -0.79
CHD8-203ENST00000553283 TICRRQ7Z2Z1 1910 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 CACNA1BQ00975 2339 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 SLC30A4O14863 429 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 PPP1R37O75864 691 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 HMGA1P17096 107 aaKnown RBP10.11□□□□□ -0.79
CHD8-203ENST00000553283 DDX6P26196 483 aaKnown RBP eCLIP10.11□□□□□ -0.79
CHD8-203ENST00000553283 AVPR1AP37288 418 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 PNPLA4P41247 253 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 NLRP12P59046 1061 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 CSRP2Q16527 193 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 NFE2Q16621 373 aaPredicted RBP10.11□□□□□ -0.79
CHD8-203ENST00000553283 SV2CQ496J9 727 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 CEP68Q76N32 757 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 DYMQ7RTS9 669 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.11□□□□□ -0.79
CHD8-203ENST00000553283 WDR5BQ86VZ2 330 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 SFR1Q86XK3 245 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 EFCAB13Q8IY85 973 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 USP13Q92995 863 aaPredicted RBP10.11□□□□□ -0.79
CHD8-203ENST00000553283 HVCN1Q96D96 273 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 ZNF560Q96MR9 790 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 TMLHEQ9NVH6 421 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 ABI2Q9NYB9 513 aaPredicted RBP10.11□□□□□ -0.79
CHD8-203ENST00000553283 SEL1LQ9UBV2 794 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 STK17AQ9UEE5 414 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 CCDC39Q9UFE4 941 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 EXOC7Q9UPT5 735 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 PCDHB5Q9Y5E4 795 aa10.11□□□□□ -0.79
CHD8-203ENST00000553283 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.1□□□□□ -0.79
CHD8-203ENST00000553283 TRDMT1O14717 391 aaKnown RBP10.1□□□□□ -0.79
CHD8-203ENST00000553283 EXTL3O43909 919 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 FOXD2O60548 495 aaPredicted RBP10.1□□□□□ -0.79
CHD8-203ENST00000553283 ATG13O75143 517 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 PRPF40AO75400 957 aaKnown RBP10.1□□□□□ -0.79
CHD8-203ENST00000553283 CSH1P0DML2 217 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 CSH2P0DML3 217 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 GAP43P17677 238 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 HOXC13P31276 330 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 TFAMQ00059 246 aaKnown RBP10.1□□□□□ -0.79
CHD8-203ENST00000553283 TSPY1Q01534 308 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 KCNA1Q09470 495 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 GRSF1Q12849 480 aaKnown RBP eCLIP10.1□□□□□ -0.79
CHD8-203ENST00000553283 RUNX3Q13761 415 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 TMEM196Q5HYL7 178 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 TXNDC8Q6A555 127 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 FSTL4Q6MZW2 842 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 PRR23CQ6ZRP0 262 aa10.1□□□□□ -0.79
CHD8-203ENST00000553283 SV2BQ7L1I2 683 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms