RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 CDC25CP30307 473 aa13.62□□□□□ -0.23
SNRPF-204ENST00000552085 ZNF33AQ06730 810 aa13.62□□□□□ -0.23
SNRPF-204ENST00000552085 BFSP1Q12934 665 aa13.62□□□□□ -0.23
SNRPF-204ENST00000552085 PRPF4BQ13523 1007 aaKnown RBP13.62□□□□□ -0.23
SNRPF-204ENST00000552085 TAF1BQ53T94 588 aaPredicted RBP13.62□□□□□ -0.23
SNRPF-204ENST00000552085 ITIH5Q86UX2 942 aa13.62□□□□□ -0.23
SNRPF-204ENST00000552085 DEFB119Q8N690 84 aa13.62□□□□□ -0.23
SNRPF-204ENST00000552085 SETD7Q8WTS6 366 aaKnown RBP13.62□□□□□ -0.23
SNRPF-204ENST00000552085 USP13Q92995 863 aaPredicted RBP13.62□□□□□ -0.23
SNRPF-204ENST00000552085 GCNAQ96QF7 691 aa13.62□□□□□ -0.23
SNRPF-204ENST00000552085 KIF9Q9HAQ2 790 aa13.62□□□□□ -0.23
SNRPF-204ENST00000552085 BCCIPQ9P287 314 aaKnown RBP eCLIP13.62□□□□□ -0.23
SNRPF-204ENST00000552085 ZMYM5Q9UJ78 669 aa13.62□□□□□ -0.23
SNRPF-204ENST00000552085 BRPF3Q9ULD4 1205 aa13.62□□□□□ -0.23
SNRPF-204ENST00000552085 SLC27A5Q9Y2P5 690 aa13.62□□□□□ -0.23
SNRPF-204ENST00000552085 A0A1W2PQD8 194 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 K7EQS6 105 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 RRP8O43159 456 aaKnown RBP13.61□□□□□ -0.23
SNRPF-204ENST00000552085 DGAT1O75907 488 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 OR4Q2P0C623 313 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 ATXN1LP0C7T5 689 aaKnown RBP13.61□□□□□ -0.23
SNRPF-204ENST00000552085 HLA-EP13747 358 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 AVPR1AP37288 418 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 RPL6Q02878 288 aaKnown RBP13.61□□□□□ -0.23
SNRPF-204ENST00000552085 EPHA7Q15375 998 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 PLEKHG6Q3KR16 790 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 EEF1DP3Q658K8 133 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 SLC36A4Q6YBV0 504 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 ZBTB8OSQ8IWT0 167 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 RIN3Q8TB24 985 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 POLR3FQ9H1D9 316 aaPredicted RBP13.61□□□□□ -0.23
SNRPF-204ENST00000552085 ZSWIM4Q9H7M6 989 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 IL21Q9HBE4 155 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 TDP1Q9NUW8 608 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 SLC38A7Q9NVC3 462 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 RGL1Q9NZL6 768 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 PCDHB8Q9UN66 801 aa13.61□□□□□ -0.23
SNRPF-204ENST00000552085 ANTXRLA6NF34 631 aa13.6□□□□□ -0.23
SNRPF-204ENST00000552085 TLX3O43711 291 aaPredicted RBP13.6□□□□□ -0.23
SNRPF-204ENST00000552085 MARCKSP29966 332 aaPredicted RBP13.6□□□□□ -0.23
SNRPF-204ENST00000552085 MCM4P33991 863 aa13.6□□□□□ -0.23
SNRPF-204ENST00000552085 MRPS21P82921 87 aaKnown RBP13.6□□□□□ -0.23
SNRPF-204ENST00000552085 CTTNQ14247 550 aaKnown RBP13.6□□□□□ -0.23
SNRPF-204ENST00000552085 DCAF4L1Q3SXM0 396 aa13.6□□□□□ -0.23
SNRPF-204ENST00000552085 CDCA2Q69YH5 1023 aaPredicted RBP13.6□□□□□ -0.23
SNRPF-204ENST00000552085 CENPPQ6IPU0 288 aa13.6□□□□□ -0.23
SNRPF-204ENST00000552085 PGBD3Q8N328 593 aa13.6□□□□□ -0.23
SNRPF-204ENST00000552085 CCDC148Q8NFR7 591 aa13.6□□□□□ -0.23
SNRPF-204ENST00000552085 HMGB4Q8WW32 186 aa13.6□□□□□ -0.23
SNRPF-204ENST00000552085 WBP1Q96G27 269 aa13.6□□□□□ -0.23
SNRPF-204ENST00000552085 DYDC2Q96IM9 177 aa13.6□□□□□ -0.23
SNRPF-204ENST00000552085 PNMA5Q96PV4 448 aa13.6□□□□□ -0.23
SNRPF-204ENST00000552085 USP20Q9Y2K6 914 aa13.6□□□□□ -0.23
SNRPF-204ENST00000552085 GOLGA8CPA6NN73 597 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 SLC27A2O14975 620 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 SLC28A2O43868 658 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 SOAT2O75908 522 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 ATXN8OSP0DMR3 200 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 RPL9P32969 192 aaKnown RBP13.59□□□□□ -0.23
SNRPF-204ENST00000552085 CSRP3P50461 194 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 RCAN1P53805 252 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 YWHAHQ04917 246 aaPredicted RBP13.59□□□□□ -0.23
SNRPF-204ENST00000552085 GPR17Q13304 367 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 NECTIN1Q15223 517 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 COLEC12Q5KU26 742 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 PPP4R3AQ6IN85 833 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 MOXD1Q6UVY6 613 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 TTC9BQ8N6N2 239 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 MAB21L3Q8N8X9 362 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 BAHD1Q8TBE0 780 aaPredicted RBP13.59□□□□□ -0.23
SNRPF-204ENST00000552085 ATP2A3Q93084 1043 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 NXPE2Q96DL1 559 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 CDC6Q99741 560 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 ARID3AQ99856 593 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 OXCT2Q9BYC2 517 aaPredicted RBP13.59□□□□□ -0.23
SNRPF-204ENST00000552085 C22orf23Q9BZE7 217 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 LSG1Q9H089 658 aaKnown RBP13.59□□□□□ -0.23
SNRPF-204ENST00000552085 DUS2Q9NX74 493 aaKnown RBP13.59□□□□□ -0.23
SNRPF-204ENST00000552085 DAXXQ9UER7 740 aaPredicted RBP13.59□□□□□ -0.23
SNRPF-204ENST00000552085 DDX25Q9UHL0 483 aaKnown RBP13.59□□□□□ -0.23
SNRPF-204ENST00000552085 ANK1P16157 1881 aa13.59□□□□□ -0.23
SNRPF-204ENST00000552085 MTMR11A4FU01 709 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 PLK4O00444 970 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 SLC37A4O43826 429 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 OAZ2O95190 189 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 GRIK2Q13002 908 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 MTF1Q14872 753 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 SMAD1Q15797 465 aaKnown RBP13.58□□□□□ -0.24
SNRPF-204ENST00000552085 XKR4Q5GH76 650 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 CREB3L3Q68CJ9 461 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 FMNL3Q8IVF7 1028 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 PIP4P2Q8N4L2 257 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 ATAD1Q8NBU5 361 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 OSCP1Q8WVF1 389 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 FAM20AQ96MK3 541 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 LPIN3Q9BQK8 851 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 ZDHHC5Q9C0B5 715 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 SEMA4CQ9C0C4 833 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 C2orf40Q9H1Z8 148 aa13.58□□□□□ -0.24
SNRPF-204ENST00000552085 FAM124BQ9H5Z6 455 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms