RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 SDK1Q7Z5N4 2213 aa23.45■■□□□ 1.34
SMARCD1-212ENST00000551966 ANK1P16157 1881 aa23.45■■□□□ 1.34
SMARCD1-212ENST00000551966 TRDMT1O14717 391 aaKnown RBP23.44■■□□□ 1.34
SMARCD1-212ENST00000551966 NFICP08651 508 aa23.44■■□□□ 1.34
SMARCD1-212ENST00000551966 CDC25CP30307 473 aa23.44■■□□□ 1.34
SMARCD1-212ENST00000551966 ATP2C1P98194 919 aaPredicted RBP23.44■■□□□ 1.34
SMARCD1-212ENST00000551966 RUNX3Q13761 415 aa23.44■■□□□ 1.34
SMARCD1-212ENST00000551966 TMEM119Q4V9L6 283 aa23.44■■□□□ 1.34
SMARCD1-212ENST00000551966 STPG1Q5TH74 334 aa23.44■■□□□ 1.34
SMARCD1-212ENST00000551966 TRIM68Q6AZZ1 485 aa23.44■■□□□ 1.34
SMARCD1-212ENST00000551966 C12orf50Q8NA57 414 aaPredicted RBP23.44■■□□□ 1.34
SMARCD1-212ENST00000551966 RIN3Q8TB24 985 aa23.44■■□□□ 1.34
SMARCD1-212ENST00000551966 LRRC15Q8TF66 581 aa23.44■■□□□ 1.34
SMARCD1-212ENST00000551966 ZSCAN31Q96LW9 406 aaPredicted RBP23.44■■□□□ 1.34
SMARCD1-212ENST00000551966 EBF3Q9H4W6 596 aa23.44■■□□□ 1.34
SMARCD1-212ENST00000551966 CHD8Q9HCK8 2581 aa23.43■■□□□ 1.34
SMARCD1-212ENST00000551966 H0YCG3 227 aa23.43■■□□□ 1.34
SMARCD1-212ENST00000551966 HNRNPDLO14979 420 aaKnown RBP23.43■■□□□ 1.34
SMARCD1-212ENST00000551966 F11P03951 625 aa23.43■■□□□ 1.34
SMARCD1-212ENST00000551966 HAPLN1P10915 354 aaPredicted RBP23.43■■□□□ 1.34
SMARCD1-212ENST00000551966 PAX3P23760 479 aa23.43■■□□□ 1.34
SMARCD1-212ENST00000551966 CD302Q8IX05 232 aa23.43■■□□□ 1.34
SMARCD1-212ENST00000551966 USP13Q92995 863 aaPredicted RBP23.43■■□□□ 1.34
SMARCD1-212ENST00000551966 ZC3H10Q96K80 434 aaKnown RBP23.43■■□□□ 1.34
SMARCD1-212ENST00000551966 REEP2Q9BRK0 252 aa23.43■■□□□ 1.34
SMARCD1-212ENST00000551966 EGFP01133 1207 aa23.42■■□□□ 1.34
SMARCD1-212ENST00000551966 HMGA1P17096 107 aaKnown RBP23.42■■□□□ 1.34
SMARCD1-212ENST00000551966 NMT1P30419 496 aaKnown RBP23.42■■□□□ 1.34
SMARCD1-212ENST00000551966 GRSF1Q12849 480 aaKnown RBP eCLIP23.42■■□□□ 1.34
SMARCD1-212ENST00000551966 VEPH1Q14D04 833 aa23.42■■□□□ 1.34
SMARCD1-212ENST00000551966 PTPAQ15257 358 aa23.42■■□□□ 1.34
SMARCD1-212ENST00000551966 MAB21L3Q8N8X9 362 aa23.42■■□□□ 1.34
SMARCD1-212ENST00000551966 MSTO1Q9BUK6 570 aa23.42■■□□□ 1.34
SMARCD1-212ENST00000551966 SLC8A2Q9UPR5 921 aa23.42■■□□□ 1.34
SMARCD1-212ENST00000551966 TSC2P49815 1807 aa23.42■■□□□ 1.34
SMARCD1-212ENST00000551966 ATG2BQ96BY7 2078 aa23.41■■□□□ 1.34
SMARCD1-212ENST00000551966 VWA3AA6NCI4 1184 aa23.41■■□□□ 1.34
SMARCD1-212ENST00000551966 ANKRD63C9JTQ0 380 aa23.41■■□□□ 1.34
SMARCD1-212ENST00000551966 CYB561D2O14569 222 aa23.41■■□□□ 1.34
SMARCD1-212ENST00000551966 ATG13O75143 517 aa23.41■■□□□ 1.34
SMARCD1-212ENST00000551966 CCDC192P0DO97 292 aa23.41■■□□□ 1.34
SMARCD1-212ENST00000551966 GALK1P51570 392 aa23.41■■□□□ 1.34
SMARCD1-212ENST00000551966 NLRP12P59046 1061 aa23.41■■□□□ 1.34
SMARCD1-212ENST00000551966 SHC2P98077 582 aa23.41■■□□□ 1.34
SMARCD1-212ENST00000551966 NAIF1Q69YI7 327 aaPredicted RBP23.41■■□□□ 1.34
SMARCD1-212ENST00000551966 MYCT1Q8N699 235 aa23.41■■□□□ 1.34
SMARCD1-212ENST00000551966 ODF2LQ9ULJ1 636 aa23.41■■□□□ 1.34
SMARCD1-212ENST00000551966 DERAQ9Y315 318 aa23.41■■□□□ 1.34
SMARCD1-212ENST00000551966 SCN1AP35498 2009 aa23.41■■□□□ 1.34
SMARCD1-212ENST00000551966 EML5Q05BV3 1969 aa23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 USP24Q9UPU5 2620 aa23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 RNF40O75150 1001 aa23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 ARSAP15289 507 aa23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 ACOT2P49753 483 aa23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 TMEM132DQ14C87 1099 aa23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 PLK5Q496M5 336 aa23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 WSCD1Q658N2 575 aa23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 TXNDC8Q6A555 127 aa23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 GCNAQ96QF7 691 aa23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 FIZ1Q96SL8 496 aa23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 PYM1Q9BRP8 204 aaKnown RBP23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 LSM14BQ9BX40 385 aaKnown RBP23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 DUSP15Q9H1R2 295 aaPredicted RBP23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 SH2B1Q9NRF2 756 aaPredicted RBP23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 TDP1Q9NUW8 608 aa23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 TMLHEQ9NVH6 421 aa23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 DSEQ9UL01 958 aa23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 PCDHGA5Q9Y5G8 931 aa23.4■■□□□ 1.34
SMARCD1-212ENST00000551966 TISP43B9A030 160 aa23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 K7ENM7 598 aa23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 AKAP3O75969 853 aa23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 KCNK5O95279 499 aa23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 GPR15P49685 360 aa23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 ZNF131P52739 623 aa23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 TAF12Q16514 161 aa23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 RILPL1Q5EBL4 403 aa23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 THEM5Q8N1Q8 247 aa23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 CAMKK1Q8N5S9 505 aa23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 STKLD1Q8NE28 680 aa23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 SPPL2BQ8TCT7 592 aa23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 C2orf15Q8WU43 125 aaKnown RBP23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 CDK5RAP3Q96JB5 506 aa23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 KIF2CQ99661 725 aa23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 CFAP47Q6ZTR5 3102 aa23.39■■□□□ 1.33
SMARCD1-212ENST00000551966 DENND4CQ5VZ89 1909 aa23.38■■□□□ 1.33
SMARCD1-212ENST00000551966 TRAK2O60296 914 aa23.38■■□□□ 1.33
SMARCD1-212ENST00000551966 AVPR1AP37288 418 aa23.38■■□□□ 1.33
SMARCD1-212ENST00000551966 MPLP40238 635 aa23.38■■□□□ 1.33
SMARCD1-212ENST00000551966 SMARCB1Q12824 385 aa23.38■■□□□ 1.33
SMARCD1-212ENST00000551966 DHX8Q14562 1220 aaKnown RBP23.38■■□□□ 1.33
SMARCD1-212ENST00000551966 TCEAL6Q6IPX3 200 aa23.38■■□□□ 1.33
SMARCD1-212ENST00000551966 GPBP1Q86WP2 473 aa23.38■■□□□ 1.33
SMARCD1-212ENST00000551966 METTL23Q86XA0 190 aa23.38■■□□□ 1.33
SMARCD1-212ENST00000551966 EZH1Q92800 747 aaPredicted RBP23.38■■□□□ 1.33
SMARCD1-212ENST00000551966 TCEAL3Q969E4 200 aa23.38■■□□□ 1.33
SMARCD1-212ENST00000551966 CCSER1Q9C0I3 900 aa23.38■■□□□ 1.33
SMARCD1-212ENST00000551966 ASB7Q9H672 318 aa23.38■■□□□ 1.33
SMARCD1-212ENST00000551966 BLOC1S4Q9NUP1 217 aa23.38■■□□□ 1.33
SMARCD1-212ENST00000551966 DPP3Q9NY33 737 aa23.38■■□□□ 1.33
SMARCD1-212ENST00000551966 ABI2Q9NYB9 513 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms