RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 PHF2O75151 1096 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 CSDE1O75534 798 aaKnown RBP9.74□□□□□ -0.85
TMEM116-213ENST00000550831 HMGCRP04035 888 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 ITGB3P05106 788 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 WEE2P0C1S8 567 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 FAM163BP0C2L3 166 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 PYGMP11217 842 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 VDRP11473 427 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 ITGA4P13612 1032 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 KCNE1P15382 129 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 CYP2B6P20813 491 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 CYP3A5P20815 502 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 CTGFP29279 349 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 ECHS1P30084 290 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 GBP1P32455 592 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 FNTAP49354 379 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 FCGRTP55899 365 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 GUCY2DQ02846 1103 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 PTPN11Q06124 597 aaPredicted RBP9.74□□□□□ -0.85
TMEM116-213ENST00000550831 HIC1Q14526 733 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 SNX17Q15036 470 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 CNGA2Q16280 664 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 WDR72Q3MJ13 1102 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 RUFY4Q6ZNE9 571 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 CATSPER4Q7RTX7 472 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 LIMS2Q7Z4I7 341 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 SESTD1Q86VW0 696 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 KATNAL2Q8IYT4 538 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 SLC4A11Q8NBS3 891 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 C1orf131Q8NDD1 294 aaKnown RBP9.74□□□□□ -0.85
TMEM116-213ENST00000550831 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.74□□□□□ -0.85
TMEM116-213ENST00000550831 FAM71BQ8TC56 605 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 CASKIN2Q8WXE0 1202 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 TFAP2BQ92481 460 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 HPDLQ96IR7 371 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 SCLT1Q96NL6 688 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 C11orf70Q9BRQ4 267 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 RAB17Q9H0T7 212 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 SDCBP2Q9H190 292 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 FAM114A2Q9NRY5 505 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 DPP3Q9NY33 737 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 TRIM17Q9Y577 477 aa9.74□□□□□ -0.85
TMEM116-213ENST00000550831 PODXLO00592 558 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 ZMYND10O75800 440 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 NPTXRO95502 500 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 CALCAP01258 141 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 BRD2P25440 801 aaKnown RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 POLR2BP30876 1174 aaKnown RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 PTPN7P35236 360 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 HSPA9P38646 679 aaKnown RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 MARCKSL1P49006 195 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 CARSP49589 748 aaKnown RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 YARSP54577 528 aaKnown RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 RNASE9P60153 205 aaKnown RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 LACTBP83111 547 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 MYO1EQ12965 1108 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 PIGHQ14442 188 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 ZNF268Q14587 947 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 MFSD14CQ5VZR4 134 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 DUPD1Q68J44 220 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 MMS22LQ6ZRQ5 1243 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 RHOT1Q8IXI2 618 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 KLHL7Q8IXQ5 586 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 PRELID2Q8N945 189 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 TRPV1Q8NER1 839 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 BEST2Q8NFU1 509 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 EXD1Q8NHP7 514 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 TMEM176AQ96HP8 235 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 EPAS1Q99814 870 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 SH3GL2Q99962 352 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 MTG1Q9BT17 334 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 AP1M1Q9BXS5 423 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 DDX47Q9H0S4 455 aaKnown RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 CDHR5Q9HBB8 845 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 MTUS1Q9ULD2 1270 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 UBQLN1Q9UMX0 589 aaKnown RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 POLIQ9UNA4 740 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 AGAP1Q9UPQ3 857 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 NR2E1Q9Y466 385 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 TRIP12Q14669 1992 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 TRIP11Q15643 1979 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 SIGLEC16A6NMB1 481 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 O00370 1275 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 PIRO00625 290 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 TLR3O15455 904 aaKnown RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 SEPT4O43236 478 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 TREHO43280 583 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 XPOTO43592 962 aaKnown RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 CD4P01730 458 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 MYL3P08590 195 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 KRT19P08727 400 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 SETSIPP0DME0 302 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 CD58P19256 250 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 CST5P28325 142 aaPredicted RBP9.73□□□□□ -0.85
TMEM116-213ENST00000550831 PTGIRP43119 386 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 COPS2P61201 443 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 ACAP1Q15027 740 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 PTPROQ16827 1216 aa9.73□□□□□ -0.85
TMEM116-213ENST00000550831 UBXN11Q5T124 520 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms