RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 LBX1P52954 281 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 CAP1Q01518 475 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 KCNAB2Q13303 367 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 ACVR2BQ13705 512 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 SLC9A5Q14940 896 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 LETM2Q2VYF4 491 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 TTC38Q5R3I4 469 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 ACBD5Q5T8D3 534 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-213ENST00000550629 ARL6IP4Q66PJ3 421 aaKnown RBP6.45□□□□□ -1.38
SCAF11-213ENST00000550629 IQSEC1Q6DN90 963 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 FBXO46Q6PJ61 603 aaPredicted RBP6.45□□□□□ -1.38
SCAF11-213ENST00000550629 CLEC17AQ6ZS10 378 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 CEP68Q76N32 757 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 RCBTB1Q8NDN9 531 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 FEZF2Q8TBJ5 459 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 TRIB2Q92519 343 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 LENG9Q96B70 501 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 RIT2Q99578 217 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 SENP7Q9BQF6 1050 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 KATNBL1Q9H079 304 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 KCNMB3Q9NPA1 279 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 TBC1D22BQ9NU19 505 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 FLRT1Q9NZU1 646 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 DDX25Q9UHL0 483 aaKnown RBP6.45□□□□□ -1.38
SCAF11-213ENST00000550629 GABRQQ9UN88 632 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 LRRC37A2A6NM11 1700 aa6.45□□□□□ -1.38
SCAF11-213ENST00000550629 IPO5O00410 1097 aaKnown RBP6.44□□□□□ -1.38
SCAF11-213ENST00000550629 SEPT4O43236 478 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 MSCO60682 206 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 STK10O94804 968 aaKnown RBP6.44□□□□□ -1.38
SCAF11-213ENST00000550629 BAG4O95429 457 aaKnown RBP6.44□□□□□ -1.38
SCAF11-213ENST00000550629 TDP2O95551 362 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 YEATS4O95619 227 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 PLA2G1BP04054 148 aaKnown RBP6.44□□□□□ -1.38
SCAF11-213ENST00000550629 CYBAP13498 195 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 CYP2C19P33261 490 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 MCM7P33993 719 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 BCL6P41182 706 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 UBXN2AP68543 259 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 KRT85P78386 507 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 RBM10P98175 930 aaKnown RBP6.44□□□□□ -1.38
SCAF11-213ENST00000550629 ATP2C1P98194 919 aaPredicted RBP6.44□□□□□ -1.38
SCAF11-213ENST00000550629 KRTAP1-1Q07627 177 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 NEDD9Q14511 834 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 SLC39A14Q15043 492 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 TESK1Q15569 626 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 CALCRLQ16602 461 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 CCL14Q16627 93 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 DUSP28Q4G0W2 176 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 PRR16Q569H4 304 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 SLC35F1Q5T1Q4 408 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 ANO1Q5XXA6 986 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 TAPT1Q6NXT6 567 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 CCDC62Q6P9F0 684 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 PLA2G4DQ86XP0 818 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 ETNPPLQ8TBG4 499 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 KCNG4Q8TDN1 519 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 SLC5A5Q92911 643 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 FERMT2Q96AC1 680 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 PGBD1Q96JS3 809 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 MTMR9Q96QG7 549 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 ZNF577Q9BSK1 485 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 WDR11Q9BZH6 1224 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 SCAND2PQ9GZW5 306 aaPredicted RBP6.44□□□□□ -1.38
SCAF11-213ENST00000550629 AGO4Q9HCK5 861 aaKnown RBP6.44□□□□□ -1.38
SCAF11-213ENST00000550629 KCNH7Q9NS40 1196 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 FBXL7Q9UJT9 491 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 FAM184BQ9ULE4 1060 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 FAN1Q9Y2M0 1017 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 Q9Y3F1 56 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 PTCH2Q9Y6C5 1203 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 LCTP09848 1927 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 NFASCO94856 1347 aa6.44□□□□□ -1.38
SCAF11-213ENST00000550629 MSH4O15457 936 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 SLC26A4O43511 780 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 SLC37A4O43826 429 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 DUSP11O75319 330 aaKnown RBP6.43□□□□□ -1.38
SCAF11-213ENST00000550629 OR52Z1P0C646 297 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 TXNP10599 105 aaKnown RBP6.43□□□□□ -1.38
SCAF11-213ENST00000550629 AKR1A1P14550 325 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 KCNA2P16389 499 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 SFNP31947 248 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 LTBRP36941 435 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 NKX3-2P78367 333 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 TNFAIP2Q03169 654 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 CACNB2Q08289 660 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-213ENST00000550629 PDIA5Q14554 519 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 PTPAQ15257 358 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 SKOR2Q2VWA4 1001 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-213ENST00000550629 CCDC144BQ3MJ40 725 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 SLC9C1Q4G0N8 1177 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 METTL7BQ6UX53 244 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 B3GNT8Q7Z7M8 397 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 DCP2Q8IU60 420 aaKnown RBP6.43□□□□□ -1.38
SCAF11-213ENST00000550629 FBXO16Q8IX29 292 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-213ENST00000550629 SMAP1Q8IYB5 467 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-213ENST00000550629 ZDHHC14Q8IZN3 488 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 C4orf32Q8N8J7 132 aa6.43□□□□□ -1.38
SCAF11-213ENST00000550629 TP53I13Q8NBR0 393 aaPredicted RBP6.43□□□□□ -1.38
SCAF11-213ENST00000550629 RDM1Q8NG50 284 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms