RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 IGDCC4Q8TDY8 1250 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 ZNF512BQ96KM6 892 aaPredicted RBP13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 TMEM106CQ9BVX2 250 aa13.04□□□□□ -0.32
RAB3IP-212ENST00000550536 CTSHP09668 335 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 GPD1P21695 349 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 PNPLA4P41247 253 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 IPMKQ8NFU5 416 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 WNK4Q96J92 1243 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 PRMT7Q9NVM4 692 aaPredicted RBP13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 NMRK1Q9NWW6 199 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 XRRA1Q6P2D8 792 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 OPTNQ96CV9 577 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 HES6Q96HZ4 224 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 APOL5Q9BWW9 433 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 FAM49BQ9NUQ9 324 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 GAS2O43903 313 aaKnown RBP13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 CENPCQ03188 943 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 PHKG1Q16816 387 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 KIF1AQ12756 1690 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 SRP72O76094 671 aaKnown RBP13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 ARHGAP15Q53QZ3 475 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 EFHC1Q5JVL4 640 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 SETD3Q86TU7 594 aaPredicted RBP13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 TBC1D16Q8TBP0 767 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 USE1Q9NZ43 259 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 FAM83EQ2M2I3 478 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 VPS33BQ9H267 617 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 DAB1O75553 588 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 FKBP9O95302 570 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 NFIXQ14938 502 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 BTNL9Q6UXG8 535 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 FKBP9P1Q75LS8 142 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 CCT8L2Q96SF2 557 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 TRIM51Q9BSJ1 452 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 SLC25A13Q9UJS0 675 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 EIF3HO15372 352 aaKnown RBP eCLIP13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 ADCY3O60266 1144 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 NDUFB10O96000 172 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 HMBSP08397 361 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 ACTN3Q08043 901 aaPredicted RBP13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 CSTF3Q12996 717 aaKnown RBP13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 CDH18Q13634 790 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 TAF1CQ15572 869 aaPredicted RBP13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 CCDC142Q17RM4 750 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 C10orf120Q5SQS8 335 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 TRIM65Q6PJ69 517 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 CHP1Q99653 195 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 ZFYVE28Q9HCC9 887 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 RIC8BQ9NVN3 520 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 C6orf203Q9P0P8 240 aaPredicted RBP13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 CPS1P31327 1500 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 DIP2BQ9P265 1576 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 UBXN8O00124 270 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 FAM107AO95990 144 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 MLNP12872 115 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 PMS1P54277 932 aaKnown RBP13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 CLEC16AQ2KHT3 1053 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 TRPM8Q7Z2W7 1104 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 HACL1Q9UJ83 578 aa13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 DBR1Q9UK59 544 aaKnown RBP13.03□□□□□ -0.32
RAB3IP-212ENST00000550536 SOAT1P35610 550 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 CAPZA2P47755 286 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 POU4F1Q01851 419 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 SBK1Q52WX2 424 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 ATG9AQ7Z3C6 839 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 PPIL6Q8IXY8 311 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 KIAA2013Q8IYS2 634 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 GPRC5AQ8NFJ5 357 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 GJD4Q96KN9 370 aaPredicted RBP13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 RUNX1T1Q06455 604 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 SREBF2Q12772 1141 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 PLA2G4FQ68DD2 849 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 THTPAQ9BU02 230 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 DDX28Q9NUL7 540 aaKnown RBP13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 ZSCAN32Q9NX65 697 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 AXIN2Q9Y2T1 843 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 ERCC6L2Q5T890 1561 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 TRPC5OSA6NMA1 111 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 SLC25A27O95847 323 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 KCNK10P57789 538 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 BAATQ14032 418 aaPredicted RBP13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 ZRANB3Q5FWF4 1079 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 GPAT2Q6NUI2 795 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 ARMC6Q6NXE6 501 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 CDR2LQ86X02 465 aaPredicted RBP13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 SYN2Q92777 582 aaPredicted RBP13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 AGBL1Q96MI9 1066 aa13.02□□□□□ -0.32
RAB3IP-212ENST00000550536 PSMA4P25789 261 aaKnown RBP13.02□□□□□ -0.33
RAB3IP-212ENST00000550536 LVRNQ6Q4G3 990 aa13.02□□□□□ -0.33
RAB3IP-212ENST00000550536 HHIPL2Q6UWX4 724 aa13.02□□□□□ -0.33
RAB3IP-212ENST00000550536 MANSC1Q9H8J5 431 aa13.02□□□□□ -0.33
RAB3IP-212ENST00000550536 CHMP2BQ9UQN3 213 aa13.02□□□□□ -0.33
RAB3IP-212ENST00000550536 DTNAQ9Y4J8 743 aa13.02□□□□□ -0.33
RAB3IP-212ENST00000550536 RRN3P2A6NIE6 340 aa13.02□□□□□ -0.33
RAB3IP-212ENST00000550536 AIM2O14862 343 aa13.02□□□□□ -0.33
RAB3IP-212ENST00000550536 ALDH1A2O94788 518 aa13.02□□□□□ -0.33
RAB3IP-212ENST00000550536 SNRPAP09012 282 aaKnown RBP13.02□□□□□ -0.33
RAB3IP-212ENST00000550536 PYGMP11217 842 aa13.02□□□□□ -0.33
RAB3IP-212ENST00000550536 CHRNA5P30532 468 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms