RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 HAPLN1P10915 354 aaPredicted RBP23.42■■□□□ 1.34
SMARCC2-210ENST00000550519 PLCB2Q00722 1185 aa23.42■■□□□ 1.34
SMARCC2-210ENST00000550519 POSTNQ15063 836 aa23.42■■□□□ 1.34
SMARCC2-210ENST00000550519 PTPAQ15257 358 aa23.42■■□□□ 1.34
SMARCC2-210ENST00000550519 LAIR1Q6GTX8 287 aa23.42■■□□□ 1.34
SMARCC2-210ENST00000550519 DYMQ7RTS9 669 aa23.42■■□□□ 1.34
SMARCC2-210ENST00000550519 NT5DC4Q86YG4 428 aa23.42■■□□□ 1.34
SMARCC2-210ENST00000550519 TTC8Q8TAM2 541 aa23.42■■□□□ 1.34
SMARCC2-210ENST00000550519 POMGNT1Q8WZA1 660 aa23.42■■□□□ 1.34
SMARCC2-210ENST00000550519 SEL1LQ9UBV2 794 aa23.42■■□□□ 1.34
SMARCC2-210ENST00000550519 STK17AQ9UEE5 414 aa23.42■■□□□ 1.34
SMARCC2-210ENST00000550519 RAB23Q9ULC3 237 aa23.42■■□□□ 1.34
SMARCC2-210ENST00000550519 CLIC4Q9Y696 253 aa23.42■■□□□ 1.34
SMARCC2-210ENST00000550519 KPNA7A9QM74 516 aa23.41■■□□□ 1.34
SMARCC2-210ENST00000550519 K7ESF4 209 aa23.41■■□□□ 1.34
SMARCC2-210ENST00000550519 IL18RAPO95256 599 aa23.41■■□□□ 1.34
SMARCC2-210ENST00000550519 ATXN1P54253 815 aaKnown RBP23.41■■□□□ 1.34
SMARCC2-210ENST00000550519 Q6ZS52 159 aa23.41■■□□□ 1.34
SMARCC2-210ENST00000550519 GIPC2Q8TF65 315 aa23.41■■□□□ 1.34
SMARCC2-210ENST00000550519 SLC46A2Q9BY10 475 aa23.41■■□□□ 1.34
SMARCC2-210ENST00000550519 ZMYM5Q9UJ78 669 aa23.41■■□□□ 1.34
SMARCC2-210ENST00000550519 USP18Q9UMW8 372 aa23.41■■□□□ 1.34
SMARCC2-210ENST00000550519 HRO43593 1189 aa23.4■■□□□ 1.34
SMARCC2-210ENST00000550519 TNK2Q07912 1038 aa23.4■■□□□ 1.34
SMARCC2-210ENST00000550519 DMWDQ09019 674 aa23.4■■□□□ 1.34
SMARCC2-210ENST00000550519 KCNA1Q09470 495 aa23.4■■□□□ 1.34
SMARCC2-210ENST00000550519 CCINQ13939 588 aa23.4■■□□□ 1.34
SMARCC2-210ENST00000550519 LPAL2Q16609 132 aa23.4■■□□□ 1.34
SMARCC2-210ENST00000550519 SV2CQ496J9 727 aa23.4■■□□□ 1.34
SMARCC2-210ENST00000550519 DCP1BQ8IZD4 617 aaKnown RBP23.4■■□□□ 1.34
SMARCC2-210ENST00000550519 DNAJC19Q96DA6 116 aa23.4■■□□□ 1.34
SMARCC2-210ENST00000550519 GCNAQ96QF7 691 aa23.4■■□□□ 1.34
SMARCC2-210ENST00000550519 ABI2Q9NYB9 513 aaPredicted RBP23.4■■□□□ 1.34
SMARCC2-210ENST00000550519 CCDC39Q9UFE4 941 aa23.4■■□□□ 1.34
SMARCC2-210ENST00000550519 FBXO2Q9UK22 296 aaPredicted RBP23.4■■□□□ 1.34
SMARCC2-210ENST00000550519 ANK1P16157 1881 aa23.39■■□□□ 1.34
SMARCC2-210ENST00000550519 MYMKA6NI61 221 aa23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 CHURC1-FNTBB4DL54 471 aa23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 CNR2P34972 360 aa23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 FNTBP49356 437 aa23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 WNT7BP56706 349 aa23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 CUL4AQ13619 759 aa23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 PON2Q15165 354 aa23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 TAF12Q16514 161 aa23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 TMEM150AQ86TG1 271 aa23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 CMTM8Q8IZV2 173 aa23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 SYNPOQ8N3V7 929 aa23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 ZNF560Q96MR9 790 aa23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 SMG9Q9H0W8 520 aaKnown RBP23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 MRPL44Q9H9J2 332 aaKnown RBP23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 SRPRBQ9Y5M8 271 aaKnown RBP23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 NUP210Q8TEM1 1887 aaPredicted RBP23.39■■□□□ 1.33
SMARCC2-210ENST00000550519 VPS37CA5D8V6 355 aaPredicted RBP23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 F11P03951 625 aa23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 RETP07949 1114 aa23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 HMGA1P17096 107 aaKnown RBP23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 GAP43P17677 238 aa23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 HOXA6P31267 233 aa23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 PNPLA4P41247 253 aa23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 SPEM2Q0P670 501 aa23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 ITPRIPL2Q3MIP1 535 aa23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 L1TD1Q5T7N2 865 aaKnown RBP23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 PRR23BQ6ZRT6 265 aa23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 LONP2Q86WA8 852 aa23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 FAM213AQ9BRX8 229 aa23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 TMLHEQ9NVH6 421 aa23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 C2orf42Q9NWW7 574 aa23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 THG1LQ9NWX6 298 aaKnown RBP23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 CDV3Q9UKY7 258 aaKnown RBP23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 EXOC7Q9UPT5 735 aa23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 PCDHB5Q9Y5E4 795 aa23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 SPTBN2O15020 2390 aa23.38■■□□□ 1.33
SMARCC2-210ENST00000550519 LRP3O75074 770 aa23.37■■□□□ 1.33
SMARCC2-210ENST00000550519 NLRP12P59046 1061 aa23.37■■□□□ 1.33
SMARCC2-210ENST00000550519 SIM2Q14190 667 aaPredicted RBP23.37■■□□□ 1.33
SMARCC2-210ENST00000550519 RRAGBQ5VZM2 374 aa23.37■■□□□ 1.33
SMARCC2-210ENST00000550519 SV2BQ7L1I2 683 aa23.37■■□□□ 1.33
SMARCC2-210ENST00000550519 BRSK2Q8IWQ3 736 aa23.37■■□□□ 1.33
SMARCC2-210ENST00000550519 ZSWIM2Q8NEG5 633 aa23.37■■□□□ 1.33
SMARCC2-210ENST00000550519 CLIC6Q96NY7 704 aa23.37■■□□□ 1.33
SMARCC2-210ENST00000550519 ACCSQ96QU6 501 aa23.37■■□□□ 1.33
SMARCC2-210ENST00000550519 FAM83CQ9BQN1 747 aa23.37■■□□□ 1.33
SMARCC2-210ENST00000550519 OLFML3Q9NRN5 406 aa23.37■■□□□ 1.33
SMARCC2-210ENST00000550519 GKN1Q9NS71 199 aa23.37■■□□□ 1.33
SMARCC2-210ENST00000550519 TFAMQ00059 246 aaKnown RBP23.36■■□□□ 1.33
SMARCC2-210ENST00000550519 NFE2Q16621 373 aaPredicted RBP23.36■■□□□ 1.33
SMARCC2-210ENST00000550519 PDCL2Q8N4E4 241 aa23.36■■□□□ 1.33
SMARCC2-210ENST00000550519 C1orf127Q8N9H9 656 aa23.36■■□□□ 1.33
SMARCC2-210ENST00000550519 CXorf38Q8TB03 319 aa23.36■■□□□ 1.33
SMARCC2-210ENST00000550519 LEO1Q8WVC0 666 aaPredicted RBP23.36■■□□□ 1.33
SMARCC2-210ENST00000550519 RTKNQ9BST9 563 aa23.36■■□□□ 1.33
SMARCC2-210ENST00000550519 TBC1D7Q9P0N9 293 aa23.36■■□□□ 1.33
SMARCC2-210ENST00000550519 AGAP1Q9UPQ3 857 aa23.36■■□□□ 1.33
SMARCC2-210ENST00000550519 SOBPA7XYQ1 873 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 GCNT3O95395 438 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 LDHAP00338 332 aaKnown RBP23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 ITGB3P05106 788 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 CSH1P0DML2 217 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 CSH2P0DML3 217 aa23.35■■□□□ 1.33
SMARCC2-210ENST00000550519 PDCP20941 246 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms