RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 EPC1Q9H2F5 836 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 BRD9Q9H8M2 597 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 TRPV4Q9HBA0 871 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 PRMT8Q9NR22 394 aaPredicted RBP8.29□□□□□ -1.08
NEK3-201ENST00000550331 ASAH2Q9NR71 780 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 HEBP1Q9NRV9 189 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 WDR70Q9NW82 654 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 ZSCAN32Q9NX65 697 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 GMEB2Q9UKD1 530 aa8.29□□□□□ -1.08
NEK3-201ENST00000550331 RALYQ9UKM9 306 aaKnown RBP8.29□□□□□ -1.08
NEK3-201ENST00000550331 OR6C75A6NL08 312 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 SHISA7A6NL88 538 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 H3BQV1 296 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 HNRNPDLO14979 420 aaKnown RBP8.28□□□□□ -1.08
NEK3-201ENST00000550331 FAM189A1O60320 539 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 LILRB5O75023 590 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 MOSPD3O75425 235 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 PIGRP01833 764 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 ADRB2P07550 413 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 PSMC3P17980 439 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 TYMPP19971 482 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 TGM1P22735 817 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 PAX3P23760 479 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 ABCD1P33897 745 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 MATR3P43243 847 aaKnown RBP eCLIP8.28□□□□□ -1.08
NEK3-201ENST00000550331 LIG4P49917 911 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 ZNF131P52739 623 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 MLLT6P55198 1093 aaPredicted RBP8.28□□□□□ -1.08
NEK3-201ENST00000550331 PLA2G4EQ3MJ16 856 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 ARSHQ5FYA8 562 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 C1orf228Q6PIY5 440 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 VITQ6UXI7 678 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 USP37Q86T82 979 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 MAP4K3Q8IVH8 894 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 CD302Q8IX05 232 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 E2F7Q96AV8 911 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 BICD1Q96G01 975 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 MSANTD3Q96H12 275 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 ZSWIM3Q96MP5 696 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 PLIN2Q99541 437 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 REEP2Q9BRK0 252 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 HAPLN2Q9GZV7 340 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 ZNF334Q9HCZ1 680 aaPredicted RBP8.28□□□□□ -1.08
NEK3-201ENST00000550331 PARD6AQ9NPB6 346 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 CEP72Q9P209 647 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 TBX20Q9UMR3 447 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 YIPF1Q9Y548 306 aa8.28□□□□□ -1.08
NEK3-201ENST00000550331 VWA8A3KMH1 1905 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 A0A0B4J269 797 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 NPHP3-ACAD11A0A0J9YXS1 232 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 ZNF263O14978 683 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 OGTO15294 1046 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 BMP15O95972 392 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 ODC1P11926 461 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 MYL4P12829 197 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 GDI1P31150 447 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 UBA7P41226 1012 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 TNFSF9P41273 254 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 EPHB3P54753 998 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 SPAG1Q07617 926 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 GPR17Q13304 367 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 FZD5Q13467 585 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 MYBPC2Q14324 1141 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 GRM2Q14416 872 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 PPP2R5DQ14738 602 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 ENOX2Q16206 610 aaKnown RBP8.27□□□□□ -1.09
NEK3-201ENST00000550331 SPATA1Q5VX52 437 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 OVOS1Q6IE37 1185 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 TSSK4Q6SA08 328 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 SHKBP1Q8TBC3 707 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 ZSCAN18Q8TBC5 510 aaPredicted RBP8.27□□□□□ -1.09
NEK3-201ENST00000550331 NETO1Q8TDF5 533 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 CALML4Q96GE6 196 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 TMX3Q96JJ7 454 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 CHRDQ9H2X0 955 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 RPF1Q9H9Y2 349 aaKnown RBP8.27□□□□□ -1.09
NEK3-201ENST00000550331 PARVGQ9HBI0 331 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 HSFX1Q9UBD0 423 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 CPSF3Q9UKF6 684 aaKnown RBP8.27□□□□□ -1.09
NEK3-201ENST00000550331 RAB23Q9ULC3 237 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 DERAQ9Y315 318 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 ASB3Q9Y575 518 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.27□□□□□ -1.09
NEK3-201ENST00000550331 PIAS3Q9Y6X2 628 aa8.27□□□□□ -1.09
NEK3-201ENST00000550331 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.26□□□□□ -1.09
NEK3-201ENST00000550331 LACTBL1A8MY62 500 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 K7ELQ4 463 aaPredicted RBP8.26□□□□□ -1.09
NEK3-201ENST00000550331 K7ENM7 598 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 ARNTLO00327 626 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 SLC30A4O14863 429 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 TRAK2O60296 914 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 FAM13AO94988 1023 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 VNN2O95498 520 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 FGF19O95750 216 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 OR4Q2P0C623 313 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 TIMP2P16035 220 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 GJA1P17302 382 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 GJB2P29033 226 aa8.26□□□□□ -1.09
NEK3-201ENST00000550331 LONP1P36776 959 aaKnown RBP8.26□□□□□ -1.09
NEK3-201ENST00000550331 VIPR2P41587 438 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms