RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 SHKBP1Q8TBC3 707 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 PARD3BQ8TEW8 1205 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 GIPC2Q8TF65 315 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 ZNF512Q96ME7 567 aaPredicted RBP10.51□□□□□ -0.73
HDAC7-229ENST00000549883 FNBP1Q96RU3 617 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 SEPT5Q99719 369 aaPredicted RBP10.51□□□□□ -0.73
HDAC7-229ENST00000549883 XYLT2Q9H1B5 865 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.51□□□□□ -0.73
HDAC7-229ENST00000549883 ABI2Q9NYB9 513 aaPredicted RBP10.51□□□□□ -0.73
HDAC7-229ENST00000549883 GTF3C4Q9UKN8 822 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 DSEQ9UL01 958 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 DUSP12Q9UNI6 340 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 PCDHA5Q9Y5H7 936 aa10.51□□□□□ -0.73
HDAC7-229ENST00000549883 ZNF638Q14966 1978 aaKnown RBP10.51□□□□□ -0.73
HDAC7-229ENST00000549883 ANAPC1Q9H1A4 1944 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 A0A1W2PRU2 124 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 MYBPHLA2RUH7 354 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 GOLGA6L4A6NEF3 574 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 GABRDO14764 452 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 PI15O43692 258 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 AKAP3O75969 853 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 C4BPAP04003 597 aaKnown RBP10.5□□□□□ -0.73
HDAC7-229ENST00000549883 PDGFRBP09619 1106 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 HAPLN1P10915 354 aaPredicted RBP10.5□□□□□ -0.73
HDAC7-229ENST00000549883 NPR3P17342 541 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 PAX3P23760 479 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 PRCPP42785 496 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 PMS1P54277 932 aaKnown RBP10.5□□□□□ -0.73
HDAC7-229ENST00000549883 EPHA5P54756 1037 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 GPC5P78333 572 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 FAM160A1Q05DH4 1040 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 MGAT5BQ3V5L5 792 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 ZCWPW2Q504Y3 356 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 INTS6LQ5JSJ4 861 aaKnown RBP10.5□□□□□ -0.73
HDAC7-229ENST00000549883 FAM78AQ5JUQ0 283 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 GAREM2Q75VX8 874 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 DNAJB7Q7Z6W7 309 aaPredicted RBP10.5□□□□□ -0.73
HDAC7-229ENST00000549883 SLC9A9Q8IVB4 645 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 ADGRF2Q8IZF7 708 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 FBXL6Q8N531 539 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 TOP6BLQ8N6T0 577 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 RSPRY1Q96DX4 576 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 PI4K2AQ9BTU6 479 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 OXCT2Q9BYC2 517 aaPredicted RBP10.5□□□□□ -0.73
HDAC7-229ENST00000549883 SDCBP2Q9H190 292 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 IL21Q9HBE4 155 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 CRTAC1Q9NQ79 661 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 AVENQ9NQS1 362 aaPredicted RBP10.5□□□□□ -0.73
HDAC7-229ENST00000549883 CGNQ9P2M7 1197 aaKnown RBP10.5□□□□□ -0.73
HDAC7-229ENST00000549883 CA14Q9ULX7 337 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 MAFFQ9ULX9 164 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 TRAF3IP3Q9Y228 551 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 TICRRQ7Z2Z1 1910 aa10.5□□□□□ -0.73
HDAC7-229ENST00000549883 MUC6Q6W4X9 2439 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 KIF26AQ9ULI4 1882 aaPredicted RBP10.49□□□□□ -0.73
HDAC7-229ENST00000549883 TRIM49P0CI25 452 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 TRIM49CP0CI26 452 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 CD44P16070 742 aaKnown RBP10.49□□□□□ -0.73
HDAC7-229ENST00000549883 CYP2F1P24903 491 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 AVPR2P30518 371 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 VIPR2P41587 438 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 RAP1GAPP47736 663 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 ALDH1A3P47895 512 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 EPHB3P54753 998 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 CDH8P55286 799 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 CLDN10P78369 228 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 MYO1EQ12965 1108 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 GRM2Q14416 872 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 DDR2Q16832 855 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 CWF19L1Q69YN2 538 aaKnown RBP10.49□□□□□ -0.73
HDAC7-229ENST00000549883 IQCEQ6IPM2 695 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 SPOPLQ6IQ16 392 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 PDZD4Q76G19 769 aaPredicted RBP10.49□□□□□ -0.73
HDAC7-229ENST00000549883 SIX5Q8N196 739 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 GUF1Q8N442 669 aaKnown RBP10.49□□□□□ -0.73
HDAC7-229ENST00000549883 TMEM105Q8N8V8 129 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 GOLGA5Q8TBA6 731 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 PSMG2Q969U7 264 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 MMS19Q96T76 1030 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 ACBD6Q9BR61 282 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 MKNK1Q9BUB5 465 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 DPEP3Q9H4B8 488 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 SMYD3Q9H7B4 428 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 ASAH2Q9NR71 780 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 NXF1Q9UBU9 619 aaKnown RBP10.49□□□□□ -0.73
HDAC7-229ENST00000549883 WDFY4Q6ZS81 3184 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 COL4A2P08572 1712 aa10.49□□□□□ -0.73
HDAC7-229ENST00000549883 NUP210Q8TEM1 1887 aaPredicted RBP10.49□□□□□ -0.73
HDAC7-229ENST00000549883 MYH10P35580 1976 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 TRIM49BA6NDI0 452 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 PRPF40AO75400 957 aaKnown RBP10.48□□□□□ -0.73
HDAC7-229ENST00000549883 SRFP11831 508 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 HMGA1P17096 107 aaKnown RBP10.48□□□□□ -0.73
HDAC7-229ENST00000549883 BMP6P22004 513 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 WARSP23381 471 aaKnown RBP10.48□□□□□ -0.73
HDAC7-229ENST00000549883 NR2F2P24468 414 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 CACNA2D1P54289 1103 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 CYP4F8P98187 520 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 TSPY1Q01534 308 aa10.48□□□□□ -0.73
HDAC7-229ENST00000549883 PPP3CAQ08209 521 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms