RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.28□□□□□ -0.76
RAB5B-205ENST00000549034 HDAC7Q8WUI4 952 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 ATXN2LQ8WWM7 1075 aaKnown RBP10.28□□□□□ -0.76
RAB5B-205ENST00000549034 TATDN2Q93075 761 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 MSLNLQ96KJ4 702 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 RTP3Q9BQQ7 232 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 ACBD6Q9BR61 282 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 VRTNQ9H8Y1 702 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 PIDD1Q9HB75 910 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 CYP4F11Q9HBI6 524 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 DZANK1Q9NVP4 752 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 FANCLQ9NW38 375 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 SLC27A5Q9Y2P5 690 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 NFE2L3Q9Y4A8 694 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 TCF20Q9UGU0 1960 aaKnown RBP10.28□□□□□ -0.76
RAB5B-205ENST00000549034 CDH23Q9H251 3354 aa10.28□□□□□ -0.76
RAB5B-205ENST00000549034 SMTNL1A8MU46 457 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 A8MXQ7 604 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 KCNJ18B7U540 433 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 PRRG1O14668 218 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 GABRDO14764 452 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 HCRTO43612 131 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 ATP2C2O75185 946 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 TACC1O75410 805 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 RFPL2O75678 378 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 ZMYND10O75800 440 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 SLC34A2O95436 690 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 SEC24AO95486 1093 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 ASS1P00966 412 aaKnown RBP10.27□□□□□ -0.77
RAB5B-205ENST00000549034 WEE2P0C1S8 567 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 PRKCSHP14314 528 aaPredicted RBP10.27□□□□□ -0.77
RAB5B-205ENST00000549034 PCSK1P29120 753 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 RAP1GAPP47736 663 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 TSPY1Q01534 308 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 DUSP4Q13115 394 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 GPR17Q13304 367 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 KCNJ12Q14500 433 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 ATAT1Q5SQI0 421 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 LIN9Q5TKA1 542 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 TPGS2Q68CL5 300 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 PTCRAQ6ISU1 281 aaPredicted RBP10.27□□□□□ -0.77
RAB5B-205ENST00000549034 SCARA5Q6ZMJ2 495 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 CCDC149Q6ZUS6 474 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 LIMS2Q7Z4I7 341 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 EHBP1Q8NDI1 1231 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 OR10T2Q8NGX3 314 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 DCBLD2Q96PD2 775 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 TUBGCP2Q9BSJ2 902 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 ZCWPW1Q9H0M4 648 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 SDCBP2Q9H190 292 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 S1PR5Q9H228 398 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 ADAM7Q9H2U9 754 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 SFXN1Q9H9B4 322 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 APOBEC3GQ9HC16 384 aaKnown RBP10.27□□□□□ -0.77
RAB5B-205ENST00000549034 AFF4Q9UHB7 1163 aaKnown RBP10.27□□□□□ -0.77
RAB5B-205ENST00000549034 FBXW11Q9UKB1 542 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 GTF3C4Q9UKN8 822 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 CDH9Q9ULB4 789 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 COQ4Q9Y3A0 265 aa10.27□□□□□ -0.77
RAB5B-205ENST00000549034 MYBPHLA2RUH7 354 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 PES1O00541 588 aaKnown RBP10.26□□□□□ -0.77
RAB5B-205ENST00000549034 P4HA2O15460 535 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 CCL16O15467 120 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 MBTPS2O43462 519 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 C8AP07357 584 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 KCNQ1P51787 676 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 NOP14P78316 857 aaKnown RBP10.26□□□□□ -0.77
RAB5B-205ENST00000549034 MYL5Q02045 173 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 ITIH3Q06033 890 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 SMARCB1Q12824 385 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 PUS10Q3MIT2 529 aaKnown RBP10.26□□□□□ -0.77
RAB5B-205ENST00000549034 ZSCAN23Q3MJ62 389 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 TCP11X2Q5H9J9 407 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 INTS6LQ5JSJ4 861 aaKnown RBP10.26□□□□□ -0.77
RAB5B-205ENST00000549034 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.26□□□□□ -0.77
RAB5B-205ENST00000549034 ATAD1Q8NBU5 361 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 SLC7A14Q8TBB6 771 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 SPATA18Q8TC71 538 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 KBTBD7Q8WVZ9 684 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 ASB2Q96Q27 587 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 LPIN3Q9BQK8 851 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 SMYD3Q9H7B4 428 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 CYP3A43Q9HB55 503 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 TMLHEQ9NVH6 421 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 MAFFQ9ULX9 164 aa10.26□□□□□ -0.77
RAB5B-205ENST00000549034 DOCK6Q96HP0 2047 aa10.25□□□□□ -0.77
RAB5B-205ENST00000549034 MTMR11A4FU01 709 aa10.25□□□□□ -0.77
RAB5B-205ENST00000549034 GRXCR2A6NFK2 248 aa10.25□□□□□ -0.77
RAB5B-205ENST00000549034 BECN2A8MW95 431 aa10.25□□□□□ -0.77
RAB5B-205ENST00000549034 PMM2O15305 246 aa10.25□□□□□ -0.77
RAB5B-205ENST00000549034 LRG1P02750 347 aa10.25□□□□□ -0.77
RAB5B-205ENST00000549034 TPM2P07951 284 aa10.25□□□□□ -0.77
RAB5B-205ENST00000549034 HNRNPA1P09651 372 aaKnown RBP eCLIP10.25□□□□□ -0.77
RAB5B-205ENST00000549034 PTPN1P18031 435 aaKnown RBP10.25□□□□□ -0.77
RAB5B-205ENST00000549034 CD58P19256 250 aa10.25□□□□□ -0.77
RAB5B-205ENST00000549034 EEF1GP26641 437 aaKnown RBP10.25□□□□□ -0.77
RAB5B-205ENST00000549034 ASPAP45381 313 aa10.25□□□□□ -0.77
RAB5B-205ENST00000549034 ALDH1A3P47895 512 aa10.25□□□□□ -0.77
RAB5B-205ENST00000549034 TUFMP49411 452 aaKnown RBP10.25□□□□□ -0.77
RAB5B-205ENST00000549034 ZNF165P49910 485 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms