RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 MCCD1P59942 119 aaPredicted RBP14.46□□□□□ -0.09
HDAC7-228ENST00000548938 SNRPFP62306 86 aaKnown RBP14.46□□□□□ -0.09
HDAC7-228ENST00000548938 EFHC2Q5JST6 749 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 RNASEH2BQ5TBB1 312 aaKnown RBP14.46□□□□□ -0.09
HDAC7-228ENST00000548938 OR52E8Q6IFG1 317 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 MFSD7Q6UXD7 560 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 NLRX1Q86UT6 975 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 ZNF398Q8TD17 642 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 DTX3LQ8TDB6 740 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 SCG3Q8WXD2 468 aaKnown RBP14.46□□□□□ -0.09
HDAC7-228ENST00000548938 IWS1Q96ST2 819 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 BTBD10Q9BSF8 475 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 FBXO6Q9NRD1 293 aaPredicted RBP14.46□□□□□ -0.09
HDAC7-228ENST00000548938 SLC17A7Q9P2U7 560 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 CLUHO75153 1309 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 UTRNP46939 3433 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 SPDYE2BA6NHP3 402 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 CAPN9O14815 690 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 HNRNPCL1O60812 293 aaKnown RBP14.46□□□□□ -0.09
HDAC7-228ENST00000548938 SPDYE6P0CI01 402 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 TGFB2P61812 414 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 MORF4L2Q15014 288 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 MAP4K3Q8IVH8 894 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 TMC2Q8TDI7 906 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 TCP10LQ8TDR4 215 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 ACSF2Q96CM8 615 aaPredicted RBP14.46□□□□□ -0.09
HDAC7-228ENST00000548938 MFSD14AQ96MC6 490 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 MRPL11Q9Y3B7 192 aaKnown RBP14.46□□□□□ -0.09
HDAC7-228ENST00000548938 ZNF536O15090 1300 aa14.46□□□□□ -0.1
HDAC7-228ENST00000548938 DENND3A2RUS2 1198 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 TLR3O15455 904 aaKnown RBP14.45□□□□□ -0.1
HDAC7-228ENST00000548938 GSC2O15499 205 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 ATP9AO75110 1047 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 ENTPD3O75355 529 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 GLRA2P23416 452 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 SSTR1P30872 391 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 CETN2P41208 172 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 GEMIN4P57678 1058 aaKnown RBP14.45□□□□□ -0.1
HDAC7-228ENST00000548938 TRAF1Q13077 416 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 MTM1Q13496 603 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 TFDP1Q14186 410 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 SEPT7Q16181 437 aaKnown RBP14.45□□□□□ -0.1
HDAC7-228ENST00000548938 LIN9Q5TKA1 542 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 CENPUQ71F23 418 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 ZC3H18Q86VM9 953 aaKnown RBP14.45□□□□□ -0.1
HDAC7-228ENST00000548938 WDR60Q8WVS4 1066 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 IFT43Q96FT9 208 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 SLITRK1Q96PX8 696 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 RANBP17Q9H2T7 1088 aaKnown RBP14.45□□□□□ -0.1
HDAC7-228ENST00000548938 EXOC7Q9UPT5 735 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 ASTN2O75129 1339 aaPredicted RBP14.45□□□□□ -0.1
HDAC7-228ENST00000548938 GYG2O15488 501 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 TBX10O75333 385 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 IFNB1P01574 187 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 KRT1P04264 644 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 SERPINB3P29508 390 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 NPTX2P47972 431 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 NOMO3P69849 1222 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 ROR2Q01974 943 aaKnown RBP14.45□□□□□ -0.1
HDAC7-228ENST00000548938 ZYXQ15942 572 aaKnown RBP14.45□□□□□ -0.1
HDAC7-228ENST00000548938 WDR72Q3MJ13 1102 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 SPOPLQ6IQ16 392 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 LRRC74BQ6ZQY2 392 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 ENOSF1Q7L5Y1 443 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 LRRC6Q86X45 466 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 MFN1Q8IWA4 741 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 VCXQ9H320 206 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 ETAA1Q9NY74 926 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 COL20A1Q9P218 1284 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 RABGEF1Q9UJ41 708 aa14.45□□□□□ -0.1
HDAC7-228ENST00000548938 CLRN2A0PK11 232 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 C2orf71A6NGG8 1288 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 PSMG1O95456 288 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 SOX10P56693 466 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 OCRLQ01968 901 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 PPP1R15BQ5SWA1 713 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 FOXB2Q5VYV0 432 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 RINLQ6ZS11 566 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 ZNF677Q86XU0 584 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 APLFQ8IW19 511 aaPredicted RBP14.44□□□□□ -0.1
HDAC7-228ENST00000548938 GALNT15Q8N3T1 639 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 SPIRE2Q8WWL2 714 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 MCUR1Q96AQ8 359 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 FBXL18Q96ME1 805 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 PAFAH2Q99487 392 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 TMEM121Q9BTD3 319 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 FBXO28Q9NVF7 368 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 ZNRF3Q9ULT6 936 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 SHOC2Q9UQ13 582 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 SRCAPQ6ZRS2 3230 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 KLHL33A6NCF5 533 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 ANKRD33BA6NCL7 494 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 RPL7AP62424 266 aaKnown RBP14.44□□□□□ -0.1
HDAC7-228ENST00000548938 SLC34A1Q06495 639 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 RASA2Q15283 850 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 HIF1AQ16665 826 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 TTC7BQ86TV6 843 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 SCYL3Q8IZE3 742 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 BSNDQ8WZ55 320 aa14.44□□□□□ -0.1
HDAC7-228ENST00000548938 ZNF516Q92618 1163 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms