RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 CCDC142Q17RM4 750 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 CCDC125Q86Z20 511 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 ZNF606Q8WXB4 792 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 FOXP3Q9BZS1 431 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 CLUHO75153 1309 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 SMNDC1O75940 238 aaKnown RBP eCLIP14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 GLRA2P23416 452 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 VCPP55072 806 aaKnown RBP14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 GDF10P55107 478 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 PRKCEQ02156 737 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 C1QBPQ07021 282 aaKnown RBP14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 MORF4L2Q15014 288 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 OASLQ15646 514 aaKnown RBP14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 SMTNL2Q2TAL5 461 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 FNBP1LQ5T0N5 605 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 CYP4A22Q5TCH4 519 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 STYK1Q6J9G0 422 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 RGS9BPQ6ZS82 235 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 CENPUQ71F23 418 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 NLRP9Q7RTR0 991 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 SUPT20HQ8NEM7 779 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 RFWD2Q8NHY2 731 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 NAF1Q96HR8 494 aaKnown RBP14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 RBM41Q96IZ5 413 aaKnown RBP14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 PDLIM7Q9NR12 457 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 PSMC3IPQ9P2W1 217 aaPredicted RBP14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 ZFP69BQ9UJL9 534 aa14.9□□□□□ -0.02
RAPGEF3-218ENST00000548919 KIAA1217Q5T5P2 1943 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 ATP5HO75947 161 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 TPBGLP0DKB5 382 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 MMP8P22894 467 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 CCNG1P51959 295 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 DCUN1D2Q6PH85 259 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 TRIM72Q6ZMU5 477 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 AKT1S1Q96B36 256 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 VCPIP1Q96JH7 1222 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 DENND2DQ9H6A0 471 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 C17orf75Q9HAS0 396 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 CYP26B1Q9NR63 512 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 CYP39A1Q9NYL5 469 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 RABGEF1Q9UJ41 708 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 hCG_1818297A0A087WSY0 165 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 DGAT1O75907 488 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 EDN1P05305 212 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 BRD2P25440 801 aaKnown RBP14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 CCNHP51946 323 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 GHRHRQ02643 423 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 HIF1AQ16665 826 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 CAPRIN2Q6IMN6 1127 aaKnown RBP14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 RFWD3Q6PCD5 774 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 STK32AQ8WU08 396 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 WDR83Q9BRX9 315 aaKnown RBP14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 CYLDQ9NQC7 956 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 SLC17A7Q9P2U7 560 aa14.89□□□□□ -0.03
RAPGEF3-218ENST00000548919 RGPD3A6NKT7 1758 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 RGPD4Q7Z3J3 1758 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 ARID2Q68CP9 1835 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 CCDC189A1A4V9 331 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 WDR46O15213 610 aaKnown RBP14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 GEMIN4P57678 1058 aaKnown RBP14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 TFDP3Q5H9I0 405 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 KCNT1Q5JUK3 1230 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 CEP128Q6ZU80 1094 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 LARGE2Q8N3Y3 721 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 MCPH1Q8NEM0 835 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 INPP5DQ92835 1189 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 ATP6V0A1Q93050 837 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 TARS2Q9BW92 718 aaKnown RBP14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 KANSL3Q9P2N6 904 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 CTDP1Q9Y5B0 961 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 NFASCO94856 1347 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 TBC1D12O60347 775 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 RGS20O76081 388 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 NR3C2P08235 984 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 PEX19P40855 299 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 CDKN2BP42772 138 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 CTCFP49711 727 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 NRLP54845 237 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 SYCP2LQ5T4T6 812 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 DNAJC24Q6P3W2 148 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 DRICH1Q6PGQ1 229 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 TCP10LQ8TDR4 215 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 PTPRN2Q92932 1015 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 MIPEPQ99797 713 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 SENP1Q9P0U3 644 aa14.88□□□□□ -0.03
RAPGEF3-218ENST00000548919 A0A0G2JND7 137 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 TCRBV7S3A2A0A539 114 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 LRRIQ4A6NIV6 560 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 ZBED4O75132 1171 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 CST3P01034 146 aaPredicted RBP14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 KCNA2P16389 499 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 GCKP35557 465 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 SLC18A1P54219 525 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 NCOA4Q13772 614 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 BLMHQ13867 455 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 C3orf62Q6ZUJ4 267 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 KRT27Q7Z3Y8 459 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 CLNKQ7Z7G1 428 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 RHPN2Q8IUC4 686 aa14.87□□□□□ -0.03
RAPGEF3-218ENST00000548919 PYROXD1Q8WU10 500 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms