RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 C4orf19Q8IY42 314 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 A1CFQ9NQ94 594 aaKnown RBP14.91□□□□□ -0.02
CACNB3-209ENST00000548860 ZDHHC18Q9NUE0 388 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 ENO1P06733 434 aaKnown RBP14.91□□□□□ -0.02
CACNB3-209ENST00000548860 KRT16P08779 473 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 NQO1P15559 274 aaKnown RBP14.91□□□□□ -0.02
CACNB3-209ENST00000548860 ANXA13P27216 316 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 RFC1P35251 1148 aaPredicted RBP14.91□□□□□ -0.02
CACNB3-209ENST00000548860 LMNB2Q03252 620 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 ELP3Q9H9T3 547 aa14.91□□□□□ -0.02
CACNB3-209ENST00000548860 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.91□□□□□ -0.02
CACNB3-209ENST00000548860 SNX3O60493 162 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 SPDYE2Q495Y8 402 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 SCARA3Q6AZY7 606 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 HACE1Q8IYU2 909 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 MYH11P35749 1972 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 SMCHD1A6NHR9 2005 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 CREB3O43889 395 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 LCP1P13796 627 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 NCF2P19878 526 aaPredicted RBP14.9□□□□□ -0.02
CACNB3-209ENST00000548860 ABCG1P45844 678 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 ALDH18A1P54886 795 aaKnown RBP14.9□□□□□ -0.02
CACNB3-209ENST00000548860 GTF2BQ00403 316 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 KCTD2Q14681 263 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 SLFN12LQ6IEE8 588 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 DMAC2Q9NW81 257 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 NOCTQ9UK39 431 aaKnown RBP14.9□□□□□ -0.02
CACNB3-209ENST00000548860 SNX9Q9Y5X1 595 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 ECM29Q5VYK3 1845 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 PIK3CDO00329 1044 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 COPEO14579 308 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 B4GALT5O43286 388 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 EPHB2P29323 1055 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 EP400NLQ6ZTU2 488 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 FAM161BQ96MY7 647 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 HESX1Q9UBX0 185 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 NCANO14594 1321 aa14.9□□□□□ -0.02
CACNB3-209ENST00000548860 LOC100653049A0A140TA62 436 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 KRT34O76011 436 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 MAMLD1Q13495 774 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 TAF5Q15542 800 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 C15orf59Q2T9L4 293 aaPredicted RBP14.89□□□□□ -0.03
CACNB3-209ENST00000548860 FAM160B1Q5W0V3 765 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 NXNQ6DKJ4 435 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 MOB2Q70IA6 237 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 ABRAQ8N0Z2 381 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 PPFIBP2Q8ND30 876 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 VTI1AQ96AJ9 217 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 RAB3IPQ96QF0 476 aaPredicted RBP14.89□□□□□ -0.03
CACNB3-209ENST00000548860 UNKQ9C0B0 810 aaKnown RBP14.89□□□□□ -0.03
CACNB3-209ENST00000548860 ACSS2Q9NR19 701 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 PCMTD2Q9NV79 361 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 VTNP04004 478 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 ARFIP2P53365 341 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 WNT7BP56706 349 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 BCAR1P56945 870 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 STAT4Q14765 748 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 ZCCHC23Q6ZST2 131 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 ZNF572Q7Z3I7 529 aaPredicted RBP14.89□□□□□ -0.03
CACNB3-209ENST00000548860 LRRC6Q86X45 466 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 FBXO16Q8IX29 292 aaPredicted RBP14.89□□□□□ -0.03
CACNB3-209ENST00000548860 SLC25A41Q8N5S1 370 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 ZNF516Q92618 1163 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 FAM81BQ96LP2 452 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 ABCA3Q99758 1704 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 F7P08709 466 aaPredicted RBP14.89□□□□□ -0.03
CACNB3-209ENST00000548860 PEX5P50542 639 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 CRADDP78560 199 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 SLC15A2Q16348 729 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 TAF1BQ53T94 588 aaPredicted RBP14.89□□□□□ -0.03
CACNB3-209ENST00000548860 MAP4K3Q8IVH8 894 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 ARMC2Q8NEN0 867 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 CDHR1Q96JP9 859 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 OSBPL1AQ9BXW6 950 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 ANKEF1Q9NU02 776 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 OATP04181 439 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 CD48P09326 243 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 ARL1P40616 181 aaPredicted RBP14.89□□□□□ -0.03
CACNB3-209ENST00000548860 BTNL9Q6UXG8 535 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 PGM2Q96G03 612 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 SERPINB12Q96P63 405 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 FIZ1Q96SL8 496 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 MRPL4Q9BYD3 311 aaKnown RBP14.89□□□□□ -0.03
CACNB3-209ENST00000548860 KLK14Q9P0G3 267 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 HEY2Q9UBP5 337 aa14.89□□□□□ -0.03
CACNB3-209ENST00000548860 PAX7P23759 505 aa14.88□□□□□ -0.03
CACNB3-209ENST00000548860 ZRSR2Q15696 482 aaKnown RBP14.88□□□□□ -0.03
CACNB3-209ENST00000548860 SGSM1Q2NKQ1 1148 aa14.88□□□□□ -0.03
CACNB3-209ENST00000548860 CES3Q6UWW8 571 aa14.88□□□□□ -0.03
CACNB3-209ENST00000548860 SPOCD1Q6ZMY3 1216 aa14.88□□□□□ -0.03
CACNB3-209ENST00000548860 FITM2Q8N6M3 262 aa14.88□□□□□ -0.03
CACNB3-209ENST00000548860 DNAAF3Q8N9W5 541 aa14.88□□□□□ -0.03
CACNB3-209ENST00000548860 MBOAT7Q96N66 472 aa14.88□□□□□ -0.03
CACNB3-209ENST00000548860 TRIM55Q9BYV6 548 aa14.88□□□□□ -0.03
CACNB3-209ENST00000548860 MYLK2Q9H1R3 596 aa14.88□□□□□ -0.03
CACNB3-209ENST00000548860 VPS11Q9H270 941 aa14.88□□□□□ -0.03
CACNB3-209ENST00000548860 SLC38A10Q9HBR0 1119 aa14.88□□□□□ -0.03
CACNB3-209ENST00000548860 TXLNGQ9NUQ3 528 aa14.88□□□□□ -0.03
CACNB3-209ENST00000548860 TTLL13PA6NNM8 815 aa14.88□□□□□ -0.03
CACNB3-209ENST00000548860 H0YCG3 227 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms