RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 RNF19AQ9NV58 838 aa13.14□□□□□ -0.31
RAB5B-204ENST00000548068 ADAM22Q9P0K1 906 aa13.14□□□□□ -0.31
RAB5B-204ENST00000548068 HESX1Q9UBX0 185 aa13.14□□□□□ -0.31
RAB5B-204ENST00000548068 CNOT8Q9UFF9 292 aaKnown RBP13.14□□□□□ -0.31
RAB5B-204ENST00000548068 HMGXB4Q9UGU5 601 aa13.14□□□□□ -0.31
RAB5B-204ENST00000548068 DSEQ9UL01 958 aa13.14□□□□□ -0.31
RAB5B-204ENST00000548068 TBX21Q9UL17 535 aa13.14□□□□□ -0.31
RAB5B-204ENST00000548068 L1RE1Q9UN81 338 aa13.14□□□□□ -0.31
RAB5B-204ENST00000548068 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.14□□□□□ -0.31
RAB5B-204ENST00000548068 PCDHB7Q9Y5E2 793 aa13.14□□□□□ -0.31
RAB5B-204ENST00000548068 SAR1BQ9Y6B6 198 aa13.14□□□□□ -0.31
RAB5B-204ENST00000548068 SCN5AQ14524 2016 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 M0QYV0 167 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 O00370 1275 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 CYB561D2O14569 222 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 ENPP3O14638 875 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 SPTLC1O15269 473 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 KIF4AO95239 1232 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 SLU7O95391 586 aaKnown RBP13.13□□□□□ -0.31
RAB5B-204ENST00000548068 POMCP01189 267 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 ATP1A1P05023 1023 aaKnown RBP13.13□□□□□ -0.31
RAB5B-204ENST00000548068 SETSIPP0DME0 302 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 ODC1P11926 461 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 MMP8P22894 467 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 GNL1P36915 607 aaPredicted RBP13.13□□□□□ -0.31
RAB5B-204ENST00000548068 LHX1P48742 406 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 AARSP49588 968 aaKnown RBP eCLIP13.13□□□□□ -0.31
RAB5B-204ENST00000548068 CLCNKBP51801 687 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 AMPD2Q01433 879 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 TAP1Q03518 808 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 CKAP4Q07065 602 aaKnown RBP13.13□□□□□ -0.31
RAB5B-204ENST00000548068 UPP1Q16831 310 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 MEI1Q5TIA1 1274 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 LCLAT1Q6UWP7 414 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 DSTYKQ6XUX3 929 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 PEX26Q7Z412 305 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 SLFN11Q7Z7L1 901 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 ERICH1Q86X53 443 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 METTL23Q86XA0 190 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 CRYBG2Q8N1P7 616 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 CEP112Q8N8E3 955 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 LRRC57Q8N9N7 239 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 C1orf131Q8NDD1 294 aaKnown RBP13.13□□□□□ -0.31
RAB5B-204ENST00000548068 MNS1Q8NEH6 495 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 ZNF564Q8TBZ8 553 aaPredicted RBP13.13□□□□□ -0.31
RAB5B-204ENST00000548068 DIS3LQ8TF46 1054 aaKnown RBP13.13□□□□□ -0.31
RAB5B-204ENST00000548068 SENP8Q96LD8 212 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 FAM193BQ96PV7 902 aaPredicted RBP13.13□□□□□ -0.31
RAB5B-204ENST00000548068 TWNKQ96RR1 684 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 NUP85Q9BW27 656 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 MRPL9Q9BYD2 267 aaKnown RBP13.13□□□□□ -0.31
RAB5B-204ENST00000548068 PPP1R12CQ9BZL4 782 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 TMEM39AQ9NV64 488 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 MIOSQ9NXC5 875 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 SNX12Q9UMY4 172 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 MICAL3Q7RTP6 2002 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 TSC2P49815 1807 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 PCNTO95613 3336 aa13.13□□□□□ -0.31
RAB5B-204ENST00000548068 CASTOR2A6NHX0 329 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 ENC1O14682 589 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 MICAL2O94851 1124 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 TUBB4BP68371 445 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 RNASELQ05823 741 aaKnown RBP13.12□□□□□ -0.31
RAB5B-204ENST00000548068 ARHGAP17Q68EM7 881 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 CNKSR3Q6P9H4 555 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 DCLRE1AQ6PJP8 1040 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 MMS22LQ6ZRQ5 1243 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 DNAAF5Q86Y56 855 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 NPAS4Q8IUM7 802 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 PDCL2Q8N4E4 241 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 IPO4Q8TEX9 1081 aaKnown RBP13.12□□□□□ -0.31
RAB5B-204ENST00000548068 KBTBD7Q8WVZ9 684 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 PAWRQ96IZ0 340 aaKnown RBP13.12□□□□□ -0.31
RAB5B-204ENST00000548068 ZSWIM1Q9BR11 485 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 C11orf70Q9BRQ4 267 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 WNT8AQ9H1J5 351 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 OSGEPQ9NPF4 335 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 PARVAQ9NVD7 372 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 WDR35Q9P2L0 1181 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 AMFRQ9UKV5 643 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 STXBP5LQ9Y2K9 1186 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 CENPFP49454 3210 aa13.12□□□□□ -0.31
RAB5B-204ENST00000548068 MIF4GDA9UHW6 222 aaKnown RBP13.11□□□□□ -0.31
RAB5B-204ENST00000548068 TMEM189-UBE2V1I3L0A0 370 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 CES2O00748 559 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 ATMINO43313 823 aaPredicted RBP13.11□□□□□ -0.31
RAB5B-204ENST00000548068 BUB1BO60566 1050 aaPredicted RBP13.11□□□□□ -0.31
RAB5B-204ENST00000548068 FTCDO95954 541 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 CFHP08603 1231 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 PCSK1P29120 753 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 CYP2C18P33260 490 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 AFF1P51825 1210 aaKnown RBP13.11□□□□□ -0.31
RAB5B-204ENST00000548068 CCL23P55773 120 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 DSC1Q08554 894 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 ORC1Q13415 861 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 IKBKEQ14164 716 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 GPNMBQ14956 572 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 RPS6KA1Q15418 735 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 GOLGA7BQ2TAP0 167 aa13.11□□□□□ -0.31
RAB5B-204ENST00000548068 CLLU1OSQ5K130 101 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms