RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 SMYD3Q9H7B4 428 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 SFXN1Q9H9B4 322 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 MAN1C1Q9NR34 630 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 AFF4Q9UHB7 1163 aaKnown RBP12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 CDH9Q9ULB4 789 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 ANAPC1Q9H1A4 1944 aa12.17□□□□□ -0.46
CALCOCO1-208ENST00000547988 XIRP2A4UGR9 3374 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 DOCK8Q8NF50 2099 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 LRRN2O75325 713 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 TBXAS1P24557 533 aaPredicted RBP12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 GNL1P36915 607 aaPredicted RBP12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 ARPP19P56211 112 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 DLX2Q07687 328 aaPredicted RBP12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 INCA1Q0VD86 236 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 IQCB1Q15051 598 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 KRT31Q15323 416 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 UVSSAQ2YD98 709 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 INTS6LQ5JSJ4 861 aaKnown RBP12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 LIN9Q5TKA1 542 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 LRSAM1Q6UWE0 723 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 EP400NLQ6ZTU2 488 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 CCDC149Q6ZUS6 474 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 KREMEN2Q8NCW0 462 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 OR6B3Q8NGW1 331 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 LMO3Q8TAP4 145 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 ELMO3Q96BJ8 720 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 MSLNLQ96KJ4 702 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 NT5C1BQ96P26 610 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 MRPL45Q9BRJ2 306 aaKnown RBP12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 DNAI2Q9GZS0 605 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 SDCBP2Q9H190 292 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 GCNT4Q9P109 453 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 CLEC1BQ9P126 229 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 THEGQ9P2T0 379 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 HSFX1Q9UBD0 423 aa12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 LIMA1Q9UHB6 759 aaKnown RBP12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 BARX2Q9UMQ3 279 aaPredicted RBP12.16□□□□□ -0.46
CALCOCO1-208ENST00000547988 MTMR11A4FU01 709 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 SPDYE4A6NLX3 237 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 A8MXQ7 604 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 PAPLNO95428 1278 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 WEE2P0C1S8 567 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 OR4Q2P0C623 313 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 TRIM21P19474 475 aaKnown RBP12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 CDK11BP21127 795 aaKnown RBP12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 KCNA5P22460 613 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 ACAT1P24752 427 aaKnown RBP12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 LMO2P25791 158 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 HOXA9P31269 272 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 ELF1P32519 619 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 RAP1GAPP47736 663 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 CDH8P55286 799 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 YWHAEP62258 255 aaKnown RBP12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 TPM4P67936 248 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 ADCY1Q08828 1119 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 MAPRE1Q15691 268 aaKnown RBP12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 NFE2Q16621 373 aaPredicted RBP12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 EXOC3L4Q17RC7 722 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 SLC39A12Q504Y0 691 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 RNF19BQ6ZMZ0 732 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 GBP6Q6ZN66 633 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 UNC93AQ86WB7 457 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 TCEAL8Q8IYN2 117 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 SMRP1Q8NCR6 262 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 EHBP1Q8NDI1 1231 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 CMASQ8NFW8 434 aaPredicted RBP12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 FAM200AQ8TCP9 573 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 SPPL2BQ8TCT7 592 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 TATDN2Q93075 761 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 TNIP3Q96KP6 325 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 FAM81BQ96LP2 452 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 TMEM209Q96SK2 561 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 PKMYT1Q99640 499 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 SYT15Q9BQS2 421 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 RHOBTB2Q9BYZ6 727 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 INTS2Q9H0H0 1204 aaKnown RBP12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 TSPY26PQ9H489 355 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 CBX8Q9HC52 389 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 ZDHHC7Q9NXF8 308 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 TAB2Q9NYJ8 693 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 CD207Q9UJ71 328 aa12.15□□□□□ -0.46
CALCOCO1-208ENST00000547988 NUP210Q8TEM1 1887 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 LRRC10BA6NIK2 292 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 PES1O00541 588 aaKnown RBP12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 PRRG1O14668 218 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 HCRTO43612 131 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 ZMYND10O75800 440 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 C8AP07357 584 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 POU2F2P09086 479 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 HNRNPA1P09651 372 aaKnown RBP eCLIP12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 SPATA31D3P0C874 917 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 ZNF445P59923 1031 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 GCNT1Q02742 428 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 ITIH3Q06033 890 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 CUL2Q13617 745 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 AAK1Q2M2I8 961 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 LEXMQ3ZCV2 418 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 PPM1LQ5SGD2 360 aa12.14□□□□□ -0.47
CALCOCO1-208ENST00000547988 FAM171BQ6P995 826 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms