RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 CASP1P29466 404 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 PNPLA4P41247 253 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 GPR15P49685 360 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 CYP4F8P98187 520 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 CSTF1Q05048 431 aaKnown RBP14.37□□□□□ -0.11
CPSF6-204ENST00000547486 FCHO2Q0JRZ9 810 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 MTAPQ13126 283 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 PKP1Q13835 747 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 ZNF528Q3MIS6 628 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 LMBRD2Q68DH5 695 aaPredicted RBP14.37□□□□□ -0.11
CPSF6-204ENST00000547486 TSSK4Q6SA08 328 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 EPM2AIP1Q7L775 607 aaPredicted RBP14.37□□□□□ -0.11
CPSF6-204ENST00000547486 TMEM150AQ86TG1 271 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 ITIH5Q86UX2 942 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 CBWD2Q8IUF1 395 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 GPD1LQ8N335 351 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 STKLD1Q8NE28 680 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 OR5B17Q8NGF7 314 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 SPPL2BQ8TCT7 592 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 C2orf15Q8WU43 125 aaKnown RBP14.37□□□□□ -0.11
CPSF6-204ENST00000547486 FAM3CQ92520 227 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 E2F7Q96AV8 911 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 ZNF560Q96MR9 790 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 PI4K2AQ9BTU6 479 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 MTMR12Q9C0I1 747 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 FBXO4Q9UKT5 387 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 MRPS17Q9Y2R5 130 aaKnown RBP14.37□□□□□ -0.11
CPSF6-204ENST00000547486 PIAS3Q9Y6X2 628 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 ANK1P16157 1881 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 CACNA1IQ9P0X4 2223 aa14.37□□□□□ -0.11
CPSF6-204ENST00000547486 CHADO15335 359 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 NCAM2O15394 837 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 TGFB1I1O43294 461 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 PRAMEF12O95522 483 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 FGF19O95750 216 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 KRT19P08727 400 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 ZSCAN22P10073 491 aaPredicted RBP14.36□□□□□ -0.11
CPSF6-204ENST00000547486 CCNE1P24864 410 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 MAGEA9P43362 315 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 SOX9P48436 509 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 RBP5P82980 135 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 SMARCB1Q12824 385 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 BFSP1Q12934 665 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 CCDC142Q17RM4 750 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 WDR44Q5JSH3 913 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 SDHAF4Q5VUM1 108 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 CNNM4Q6P4Q7 775 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 OSTM1Q86WC4 334 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 DCP1BQ8IZD4 617 aaKnown RBP14.36□□□□□ -0.11
CPSF6-204ENST00000547486 LRRC52Q8N7C0 313 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 IQUBQ8NA54 791 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 SUMF1Q8NBK3 374 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 TTC8Q8TAM2 541 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 ZNF507Q8TCN5 953 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 ZFYVE19Q96K21 471 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 PKMYT1Q99640 499 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 C7orf25Q9BPX7 421 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 ACBD6Q9BR61 282 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 LRRC27Q9C0I9 530 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 SMG9Q9H0W8 520 aaKnown RBP14.36□□□□□ -0.11
CPSF6-204ENST00000547486 CUEDC2Q9H467 287 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 TASP1Q9H6P5 420 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 LMAN1LQ9HAT1 526 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 INTS13Q9NVM9 706 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 GDAP2Q9NXN4 497 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 DDX43Q9NXZ2 648 aaKnown RBP14.36□□□□□ -0.11
CPSF6-204ENST00000547486 ITGA11Q9UKX5 1188 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 PCDHA7Q9UN72 937 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 PCDHB5Q9Y5E4 795 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 SNX9Q9Y5X1 595 aa14.36□□□□□ -0.11
CPSF6-204ENST00000547486 RIF1Q5UIP0 2472 aaKnown RBP14.36□□□□□ -0.11
CPSF6-204ENST00000547486 SLC38A8A6NNN8 435 aa14.35□□□□□ -0.11
CPSF6-204ENST00000547486 POLR2DO15514 142 aaKnown RBP14.35□□□□□ -0.11
CPSF6-204ENST00000547486 HUS1O60921 280 aa14.35□□□□□ -0.11
CPSF6-204ENST00000547486 CHRNB1P11230 501 aa14.35□□□□□ -0.11
CPSF6-204ENST00000547486 CYP2F1P24903 491 aa14.35□□□□□ -0.11
CPSF6-204ENST00000547486 ASIC1P78348 528 aa14.35□□□□□ -0.11
CPSF6-204ENST00000547486 VEPH1Q14D04 833 aa14.35□□□□□ -0.11
CPSF6-204ENST00000547486 SOWAHAQ2M3V2 549 aa14.35□□□□□ -0.11
CPSF6-204ENST00000547486 YAF2Q8IY57 180 aa14.35□□□□□ -0.11
CPSF6-204ENST00000547486 NELL1Q92832 810 aa14.35□□□□□ -0.11
CPSF6-204ENST00000547486 BLZF1Q9H2G9 400 aa14.35□□□□□ -0.11
CPSF6-204ENST00000547486 HSPBP1Q9NZL4 362 aa14.35□□□□□ -0.11
CPSF6-204ENST00000547486 GTF3C4Q9UKN8 822 aa14.35□□□□□ -0.11
CPSF6-204ENST00000547486 FRYLO94915 3013 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 TSC2P49815 1807 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 MYBPHLA2RUH7 354 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 ZNF233A6NK53 670 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 GABRDO14764 452 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 ATP2C2O75185 946 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 PRPF40AO75400 957 aaKnown RBP14.34□□□□□ -0.11
CPSF6-204ENST00000547486 F13A1P00488 732 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 F11P03951 625 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 WEE1P30291 646 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 CDC25CP30307 473 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 MLLT6P55198 1093 aaPredicted RBP14.34□□□□□ -0.11
CPSF6-204ENST00000547486 NLRP12P59046 1061 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 AMPD3Q01432 767 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 TSPY1Q01534 308 aa14.34□□□□□ -0.11
CPSF6-204ENST00000547486 EHHADHQ08426 723 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms