RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 M0QYV0 167 aa11.74□□□□□ -0.53
CUX1-212ENST00000547394 ACSL3O95573 720 aa11.74□□□□□ -0.53
CUX1-212ENST00000547394 ECEL1O95672 775 aa11.74□□□□□ -0.53
CUX1-212ENST00000547394 ERBB2P04626 1255 aa11.74□□□□□ -0.53
CUX1-212ENST00000547394 IRAK1P51617 712 aa11.74□□□□□ -0.53
CUX1-212ENST00000547394 NRLP54845 237 aa11.74□□□□□ -0.53
CUX1-212ENST00000547394 TMEM132DQ14C87 1099 aa11.74□□□□□ -0.53
CUX1-212ENST00000547394 CCDC38Q502W7 563 aa11.74□□□□□ -0.53
CUX1-212ENST00000547394 ODF2Q5BJF6 829 aa11.74□□□□□ -0.53
CUX1-212ENST00000547394 MREGQ8N565 214 aa11.74□□□□□ -0.53
CUX1-212ENST00000547394 SLC4A11Q8NBS3 891 aa11.74□□□□□ -0.53
CUX1-212ENST00000547394 TMEM35BQ8NCS4 154 aa11.74□□□□□ -0.53
CUX1-212ENST00000547394 SEC14L1Q92503 715 aa11.74□□□□□ -0.53
CUX1-212ENST00000547394 OSBPL8Q9BZF1 889 aa11.74□□□□□ -0.53
CUX1-212ENST00000547394 KAT6AQ92794 2004 aa11.74□□□□□ -0.53
CUX1-212ENST00000547394 TMEM191CA6NGB0 347 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 CD48P09326 243 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 MYZAPP0CAP1 466 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 SEC24CP53992 1094 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 PSMC1P62191 440 aaKnown RBP11.73□□□□□ -0.53
CUX1-212ENST00000547394 DHX34Q14147 1143 aaKnown RBP11.73□□□□□ -0.53
CUX1-212ENST00000547394 SYCP2LQ5T4T6 812 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 CATSPER4Q7RTX7 472 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 LINC01465Q8N7H1 131 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.73□□□□□ -0.53
CUX1-212ENST00000547394 CXorf38Q8TB03 319 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 MDM1Q8TC05 714 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 LRRC45Q96CN5 670 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 RNF39Q9H2S5 420 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 METTL5Q9NRN9 209 aaKnown RBP11.73□□□□□ -0.53
CUX1-212ENST00000547394 PCYOX1Q9UHG3 505 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 RASAL2Q9UJF2 1139 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 TRIP11Q15643 1979 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 PLXNA1Q9UIW2 1896 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 PLXNB2O15031 1838 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 FSCN2O14926 492 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 TP73O15350 636 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 TREHO43280 583 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 CAND2O75155 1236 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 MAP3K6O95382 1288 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 MYL3P08590 195 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 MYBL1P10243 752 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 NR1D1P20393 614 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 CYP3A5P20815 502 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 ZNF157P51786 506 aaPredicted RBP11.73□□□□□ -0.53
CUX1-212ENST00000547394 NDST1P52848 882 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 PMS2P54278 862 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 C1QBPQ07021 282 aaKnown RBP11.73□□□□□ -0.53
CUX1-212ENST00000547394 DGKDQ16760 1214 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 CDO1Q16878 200 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 CAPN12Q6ZSI9 719 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 ANKRD23Q86SG2 305 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 RHOT1Q8IXI2 618 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 EPS8L3Q8TE67 593 aaKnown RBP11.73□□□□□ -0.53
CUX1-212ENST00000547394 ATP6V1G3Q96LB4 118 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 ACAP3Q96P50 834 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 PARK7Q99497 189 aaKnown RBP11.73□□□□□ -0.53
CUX1-212ENST00000547394 ADAM33Q9BZ11 813 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 MRPL47Q9HD33 250 aaKnown RBP11.73□□□□□ -0.53
CUX1-212ENST00000547394 DPP3Q9NY33 737 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 LCMT1Q9UIC8 334 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 SNX9Q9Y5X1 595 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 GOLGA6L10A6NI86 522 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 STRNO43815 780 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 MICAL2O94851 1124 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 SMIM10L2AP0DMW4 78 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 SMIM10L2BP0DMW5 78 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 PSMA2P25787 234 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 IL1R2P27930 398 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 HOXA11P31270 313 aaPredicted RBP11.73□□□□□ -0.53
CUX1-212ENST00000547394 ADCY8P40145 1251 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 MAGOHP61326 146 aaKnown RBP11.73□□□□□ -0.53
CUX1-212ENST00000547394 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.73□□□□□ -0.536e-12■■■■■ 49.8
CUX1-212ENST00000547394 GSTA5Q7RTV2 222 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 ARFGAP1Q8N6T3 406 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 KAT2BQ92831 832 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 TRIM11Q96F44 468 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 FAM81BQ96LP2 452 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 ZIC5Q96T25 663 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 DCLK3Q9C098 648 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 ABHD16BQ9H3Z7 469 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 TMBIM4Q9HC24 238 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 MORF4L1Q9UBU8 362 aa11.73□□□□□ -0.53
CUX1-212ENST00000547394 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.73□□□□□ -0.53
CUX1-212ENST00000547394 FAM187AA6NFU0 413 aa11.72□□□□□ -0.53
CUX1-212ENST00000547394 GCLCP48506 637 aaPredicted RBP11.72□□□□□ -0.53
CUX1-212ENST00000547394 PTPN11Q06124 597 aaPredicted RBP11.72□□□□□ -0.53
CUX1-212ENST00000547394 ADCY1Q08828 1119 aa11.72□□□□□ -0.53
CUX1-212ENST00000547394 NFX1Q12986 1120 aaKnown RBP11.72□□□□□ -0.53
CUX1-212ENST00000547394 TAF1CQ15572 869 aaPredicted RBP11.72□□□□□ -0.53
CUX1-212ENST00000547394 TRIM72Q6ZMU5 477 aa11.72□□□□□ -0.53
CUX1-212ENST00000547394 ACOT1Q86TX2 421 aa11.72□□□□□ -0.53
CUX1-212ENST00000547394 TLK2Q86UE8 772 aa11.72□□□□□ -0.53
CUX1-212ENST00000547394 MRPL45Q9BRJ2 306 aaKnown RBP11.72□□□□□ -0.53
CUX1-212ENST00000547394 DNPEPQ9ULA0 475 aa11.72□□□□□ -0.53
CUX1-212ENST00000547394 TRIP12Q14669 1992 aaPredicted RBP11.72□□□□□ -0.53
CUX1-212ENST00000547394 SCN1AP35498 2009 aa11.72□□□□□ -0.53
CUX1-212ENST00000547394 GRIN2DO15399 1336 aa11.72□□□□□ -0.53
CUX1-212ENST00000547394 MAGEB2O15479 319 aa11.72□□□□□ -0.53
CUX1-212ENST00000547394 ASAP2O43150 1006 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms