RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 LPIN1Q14693 890 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 MBTPS1Q14703 1052 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 FAM26DQ5JW98 314 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 GKAP1Q5VSY0 366 aaPredicted RBP17.51■□□□□ 0.39
BRF1-208ENST00000546997 TDRD10Q5VZ19 366 aaKnown RBP17.51■□□□□ 0.39
BRF1-208ENST00000546997 SCARA3Q6AZY7 606 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 MAATS1Q7Z4T9 603 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 CCHCR1Q8TD31 782 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 SEMA4DQ92854 862 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 SEC16BQ96JE7 1060 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 NXF3Q9H4D5 531 aaKnown RBP17.51■□□□□ 0.39
BRF1-208ENST00000546997 RPF1Q9H9Y2 349 aaKnown RBP17.51■□□□□ 0.39
BRF1-208ENST00000546997 TANC1Q9C0D5 1861 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 SCTRP47872 440 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 SLC10A6Q3KNW5 377 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 ALKBH5Q6P6C2 394 aaKnown RBP17.51■□□□□ 0.39
BRF1-208ENST00000546997 USP38Q8NB14 1042 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 TATDN2Q93075 761 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 ELMO3Q96BJ8 720 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 PBKQ96KB5 322 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 CXCL16Q9H2A7 254 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.51■□□□□ 0.392e-6■■■■■ 96.1
BRF1-208ENST00000546997 TPX2Q9ULW0 747 aaKnown RBP17.51■□□□□ 0.39
BRF1-208ENST00000546997 ATP8B3O60423 1300 aa17.51■□□□□ 0.39
BRF1-208ENST00000546997 PMM2O15305 246 aa17.5■□□□□ 0.39
BRF1-208ENST00000546997 CAND2O75155 1236 aa17.5■□□□□ 0.39
BRF1-208ENST00000546997 C4BPAP04003 597 aaKnown RBP17.5■□□□□ 0.39
BRF1-208ENST00000546997 COL6A1P12109 1028 aa17.5■□□□□ 0.39
BRF1-208ENST00000546997 RFX1P22670 979 aa17.5■□□□□ 0.39
BRF1-208ENST00000546997 GRM5P41594 1212 aa17.5■□□□□ 0.39
BRF1-208ENST00000546997 CETN1Q12798 172 aa17.5■□□□□ 0.39
BRF1-208ENST00000546997 ZACNQ401N2 412 aa17.5■□□□□ 0.39
BRF1-208ENST00000546997 VPS36Q86VN1 386 aa17.5■□□□□ 0.39
BRF1-208ENST00000546997 HINFPQ9BQA5 517 aa17.5■□□□□ 0.39
BRF1-208ENST00000546997 TRIM6Q9C030 488 aaPredicted RBP17.5■□□□□ 0.39
BRF1-208ENST00000546997 MTMR12Q9C0I1 747 aa17.5■□□□□ 0.39
BRF1-208ENST00000546997 SNTG2Q9NY99 539 aa17.5■□□□□ 0.39
BRF1-208ENST00000546997 PADI3Q9ULW8 664 aa17.5■□□□□ 0.39
BRF1-208ENST00000546997 COQ4Q9Y3A0 265 aa17.5■□□□□ 0.39
BRF1-208ENST00000546997 MROH7Q68CQ1 1323 aa17.5■□□□□ 0.39
BRF1-208ENST00000546997 LACTBL1A8MY62 500 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 DDX3XO00571 662 aaKnown RBP eCLIP17.49■□□□□ 0.39
BRF1-208ENST00000546997 NCK2O43639 380 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 NFICP08651 508 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 HSD17B3P37058 310 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 IRX1P78414 480 aaPredicted RBP17.49■□□□□ 0.39
BRF1-208ENST00000546997 TWF2Q6IBS0 349 aaKnown RBP17.49■□□□□ 0.39
BRF1-208ENST00000546997 SLC39A5Q6ZMH5 540 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 WDR49Q8IV35 697 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 TMEM130Q8N3G9 435 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 FBXL13Q8NEE6 735 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 OLIG1Q8TAK6 271 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 CCT6BQ92526 530 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 SEZ6LQ9BYH1 1024 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 MCOLN1Q9GZU1 580 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 ERVK-5Q9HDB9 667 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 PPANQ9NQ55 473 aaKnown RBP17.49■□□□□ 0.39
BRF1-208ENST00000546997 RTN2O75298 545 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 PALMO75781 387 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 SLC30A5Q8TAD4 765 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 ACTRT1Q8TDG2 376 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 FAXDC2Q96IV6 333 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 ACAP3Q96P50 834 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 KRT12Q99456 494 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 APOL6Q9BWW8 343 aa17.49■□□□□ 0.39
BRF1-208ENST00000546997 CCDC188H7C350 402 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 GPR182O15218 404 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 VNN1O95497 513 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 AKAP5P24588 427 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 GUCY2FP51841 1108 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 EIF3BP55884 814 aaKnown RBP17.48■□□□□ 0.39
BRF1-208ENST00000546997 TFAMQ00059 246 aaKnown RBP17.48■□□□□ 0.39
BRF1-208ENST00000546997 ZNF844Q08AG5 666 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 KYAT1Q16773 422 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 ARHGAP44Q17R89 818 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 TRIM60Q495X7 471 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 APBB1IPQ7Z5R6 666 aaPredicted RBP17.48■□□□□ 0.39
BRF1-208ENST00000546997 SMG8Q8ND04 991 aaKnown RBP17.48■□□□□ 0.39
BRF1-208ENST00000546997 MS4A14Q96JA4 679 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 SYT11Q9BT88 431 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 PI4K2AQ9BTU6 479 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 RNF39Q9H2S5 420 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 CENPHQ9H3R5 247 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 SMARCAL1Q9NZC9 954 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 EHD2Q9NZN4 543 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 IPPQ9Y573 584 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 FOXN3O00409 490 aaPredicted RBP17.48■□□□□ 0.39
BRF1-208ENST00000546997 MGEA5O60502 916 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 RECQL4O94761 1208 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 IL18RAPO95256 599 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 SURF1Q15526 300 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 ZKSCAN8Q15776 578 aaPredicted RBP17.48■□□□□ 0.39
BRF1-208ENST00000546997 IFI16Q16666 785 aaKnown RBP17.48■□□□□ 0.39
BRF1-208ENST00000546997 TMCO4Q5TGY1 634 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 JADE1Q6IE81 842 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 ANKRD33Q7Z3H0 272 aa17.48■□□□□ 0.39
BRF1-208ENST00000546997 LNX1Q8TBB1 728 aaPredicted RBP17.48■□□□□ 0.39
BRF1-208ENST00000546997 RSRC1Q96IZ7 334 aaKnown RBP17.48■□□□□ 0.39
BRF1-208ENST00000546997 UBE2TQ9NPD8 197 aaPredicted RBP17.48■□□□□ 0.39
BRF1-208ENST00000546997 RAB20Q9NX57 234 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms