RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 ZNF233A6NK53 670 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 MAN2B1O00754 1011 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 POLR2DO15514 142 aaKnown RBP24.46■■□□□ 1.51
CHD4-214ENST00000545942 SP9P0CG40 484 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 ME1P48163 572 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 RBP5P82980 135 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 BFSP1Q12934 665 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 FAM26FQ5R3K3 315 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 STXBP5Q5T5C0 1151 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 EPM2AIP1Q7L775 607 aaPredicted RBP24.46■■□□□ 1.51
CHD4-214ENST00000545942 ARID3BQ8IVW6 561 aaPredicted RBP24.46■■□□□ 1.51
CHD4-214ENST00000545942 TMEM86AQ8N2M4 240 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 CLDN23Q96B33 292 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 ANKRD36BP1Q96IX9 119 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 FAM84AQ96KN4 292 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 SEMA4AQ9H3S1 761 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 SPATA6Q9NWH7 488 aaPredicted RBP24.46■■□□□ 1.51
CHD4-214ENST00000545942 FAM13BQ9NYF5 915 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 HSPBP1Q9NZL4 362 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 PCDHA7Q9UN72 937 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 PCDHB5Q9Y5E4 795 aa24.46■■□□□ 1.51
CHD4-214ENST00000545942 NCANO14594 1321 aa24.45■■□□□ 1.51
CHD4-214ENST00000545942 HAPLN1P10915 354 aaPredicted RBP24.45■■□□□ 1.5
CHD4-214ENST00000545942 HOXD13P35453 343 aa24.45■■□□□ 1.5
CHD4-214ENST00000545942 SURF1Q15526 300 aa24.45■■□□□ 1.5
CHD4-214ENST00000545942 TAF12Q16514 161 aa24.45■■□□□ 1.5
CHD4-214ENST00000545942 ZC3H14Q6PJT7 736 aaKnown RBP24.45■■□□□ 1.5
CHD4-214ENST00000545942 CBWD2Q8IUF1 395 aa24.45■■□□□ 1.5
CHD4-214ENST00000545942 YAF2Q8IY57 180 aa24.45■■□□□ 1.5
CHD4-214ENST00000545942 ZNF507Q8TCN5 953 aa24.45■■□□□ 1.5
CHD4-214ENST00000545942 GCNAQ96QF7 691 aa24.45■■□□□ 1.5
CHD4-214ENST00000545942 ACBD6Q9BR61 282 aa24.45■■□□□ 1.5
CHD4-214ENST00000545942 MKNK1Q9BUB5 465 aa24.45■■□□□ 1.5
CHD4-214ENST00000545942 KIAA1586Q9HCI6 787 aa24.45■■□□□ 1.5
CHD4-214ENST00000545942 INTS13Q9NVM9 706 aa24.45■■□□□ 1.5
CHD4-214ENST00000545942 GDAP2Q9NXN4 497 aa24.45■■□□□ 1.5
CHD4-214ENST00000545942 SIX4Q9UIU6 781 aa24.45■■□□□ 1.5
CHD4-214ENST00000545942 CFAP45Q9UL16 551 aa24.45■■□□□ 1.5
CHD4-214ENST00000545942 R3HCC1Q9Y3T6 440 aaKnown RBP24.45■■□□□ 1.5
CHD4-214ENST00000545942 VPS13AQ96RL7 3174 aa24.45■■□□□ 1.5
CHD4-214ENST00000545942 SHISA7A6NL88 538 aa24.44■■□□□ 1.5
CHD4-214ENST00000545942 LAMTOR5O43504 91 aa24.44■■□□□ 1.5
CHD4-214ENST00000545942 CDC25CP30307 473 aa24.44■■□□□ 1.5
CHD4-214ENST00000545942 RPS9P46781 194 aaKnown RBP24.44■■□□□ 1.5
CHD4-214ENST00000545942 PKP1Q13835 747 aa24.44■■□□□ 1.5
CHD4-214ENST00000545942 NFE2Q16621 373 aaPredicted RBP24.44■■□□□ 1.5
CHD4-214ENST00000545942 GPR158Q5T848 1215 aa24.44■■□□□ 1.5
CHD4-214ENST00000545942 LMBRD2Q68DH5 695 aaPredicted RBP24.44■■□□□ 1.5
CHD4-214ENST00000545942 SCARA3Q6AZY7 606 aa24.44■■□□□ 1.5
CHD4-214ENST00000545942 UNC13DQ70J99 1090 aa24.44■■□□□ 1.5
CHD4-214ENST00000545942 MAML2Q8IZL2 1156 aaPredicted RBP24.44■■□□□ 1.5
CHD4-214ENST00000545942 SPATA18Q8TC71 538 aa24.44■■□□□ 1.5
CHD4-214ENST00000545942 RSPRY1Q96DX4 576 aa24.44■■□□□ 1.5
CHD4-214ENST00000545942 DDX43Q9NXZ2 648 aaKnown RBP24.44■■□□□ 1.5
CHD4-214ENST00000545942 SNX9Q9Y5X1 595 aa24.44■■□□□ 1.5
CHD4-214ENST00000545942 R4GN57 208 aa24.44■■□□□ 1.5
CHD4-214ENST00000545942 UBE4BO95155 1302 aa24.44■■□□□ 1.5
CHD4-214ENST00000545942 DPYSL4O14531 572 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 TNNC2P02585 160 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 MYL7Q01449 175 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 EHHADHQ08426 723 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 FCHO2Q0JRZ9 810 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 MYO1EQ12965 1108 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 RESP18Q5W5W9 173 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 TOP6BLQ8N6T0 577 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 SPRYD3Q8NCJ5 442 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 GIPC2Q8TF65 315 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 LEO1Q8WVC0 666 aaPredicted RBP24.43■■□□□ 1.5
CHD4-214ENST00000545942 TASP1Q9H6P5 420 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 IL21Q9HBE4 155 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 AGPAT3Q9NRZ7 376 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 TMLHEQ9NVH6 421 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 FBXO4Q9UKT5 387 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 PIAS3Q9Y6X2 628 aa24.43■■□□□ 1.5
CHD4-214ENST00000545942 ARNTLO00327 626 aa24.42■■□□□ 1.5
CHD4-214ENST00000545942 CHADO15335 359 aa24.42■■□□□ 1.5
CHD4-214ENST00000545942 DUOXA2Q1HG44 320 aa24.42■■□□□ 1.5
CHD4-214ENST00000545942 ZNF528Q3MIS6 628 aa24.42■■□□□ 1.5
CHD4-214ENST00000545942 OR5B17Q8NGF7 314 aa24.42■■□□□ 1.5
CHD4-214ENST00000545942 BLZF1Q9H2G9 400 aa24.42■■□□□ 1.5
CHD4-214ENST00000545942 OBP2AQ9NY56 170 aa24.42■■□□□ 1.5
CHD4-214ENST00000545942 NDRG2Q9UN36 371 aaKnown RBP24.42■■□□□ 1.5
CHD4-214ENST00000545942 PTPRJQ12913 1337 aa24.42■■□□□ 1.5
CHD4-214ENST00000545942 MIA3Q5JRA6 1907 aa24.42■■□□□ 1.5
CHD4-214ENST00000545942 TGFB1I1O43294 461 aa24.41■■□□□ 1.5
CHD4-214ENST00000545942 LMNAP02545 664 aaKnown RBP24.41■■□□□ 1.5
CHD4-214ENST00000545942 WEE1P30291 646 aa24.41■■□□□ 1.5
CHD4-214ENST00000545942 LHX1P48742 406 aa24.41■■□□□ 1.5
CHD4-214ENST00000545942 SNRPFP62306 86 aaKnown RBP24.41■■□□□ 1.5
CHD4-214ENST00000545942 CYP4F8P98187 520 aa24.41■■□□□ 1.5
CHD4-214ENST00000545942 DNM1Q05193 864 aaKnown RBP24.41■■□□□ 1.5
CHD4-214ENST00000545942 FZD5Q13467 585 aa24.41■■□□□ 1.5
CHD4-214ENST00000545942 SNRNP35Q16560 246 aaKnown RBP24.41■■□□□ 1.5
CHD4-214ENST00000545942 INTS6LQ5JSJ4 861 aaKnown RBP24.41■■□□□ 1.5
CHD4-214ENST00000545942 GPIHBP1Q8IV16 184 aa24.41■■□□□ 1.5
CHD4-214ENST00000545942 WDR49Q8IV35 697 aa24.41■■□□□ 1.5
CHD4-214ENST00000545942 ADGRF2Q8IZF7 708 aa24.41■■□□□ 1.5
CHD4-214ENST00000545942 ADSSL1Q8N142 457 aa24.41■■□□□ 1.5
CHD4-214ENST00000545942 ZNF687Q8N1G0 1237 aa24.41■■□□□ 1.5
CHD4-214ENST00000545942 CSGALNACT1Q8TDX6 532 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms