RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 ACTL7BQ9Y614 415 aa16.67■□□□□ 0.26
LDLR-204ENST00000545707 hCG_1818297A0A087WSY0 165 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 WDR91A4D1P6 747 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 OATP04181 439 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 ABHD2P08910 425 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 SSTR1P30872 391 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 NRLP54845 237 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 CNTN2Q02246 1040 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 LMNB2Q03252 620 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 RNASELQ05823 741 aaKnown RBP16.66■□□□□ 0.26
LDLR-204ENST00000545707 OASLQ15646 514 aaKnown RBP16.66■□□□□ 0.26
LDLR-204ENST00000545707 MSS51Q4VC12 460 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 RNASEH2BQ5TBB1 312 aaKnown RBP16.66■□□□□ 0.26
LDLR-204ENST00000545707 ANKRD22Q5VYY1 191 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 CIAPIN1Q6FI81 312 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 DHX33Q9H6R0 707 aaKnown RBP16.66■□□□□ 0.26
LDLR-204ENST00000545707 HAO1Q9UJM8 370 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 CNTN6Q9UQ52 1028 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 H0YCG3 227 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 TBXAS1P24557 533 aaPredicted RBP16.66■□□□□ 0.26
LDLR-204ENST00000545707 CDC25CP30307 473 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 ARL2P36404 184 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 VCPP55072 806 aaKnown RBP16.66■□□□□ 0.26
LDLR-204ENST00000545707 GPX6P59796 221 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 TGFB2P61812 414 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 SLC7A3Q8WY07 619 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 SMC6Q96SB8 1091 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 KLF6Q99612 283 aaPredicted RBP16.66■□□□□ 0.26
LDLR-204ENST00000545707 EBF2Q9HAK2 575 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 CISHQ9NSE2 258 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 KIAA1217Q5T5P2 1943 aa16.66■□□□□ 0.26
LDLR-204ENST00000545707 DIAPH2O60879 1101 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 UNC5CO95185 931 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 ALADP13716 330 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 CDKN2BP42772 138 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 NAMPTP43490 491 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 ZNF132P52740 706 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 CLNS1AP54105 237 aaKnown RBP16.65■□□□□ 0.26
LDLR-204ENST00000545707 HIRAP54198 1017 aaPredicted RBP16.65■□□□□ 0.26
LDLR-204ENST00000545707 ENPEPQ07075 957 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 ORC1Q13415 861 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 CAPSQ13938 189 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 TFDP1Q14186 410 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 SLFN12LQ6IEE8 588 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 VSIG1Q86XK7 387 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 IMPG2Q9BZV3 1241 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 ADGRA2Q96PE1 1338 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 TCRBV5S1A1TA0A578 114 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 GOLGA8RI6L899 631 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 RFC1P35251 1148 aaPredicted RBP16.65■□□□□ 0.26
LDLR-204ENST00000545707 SPARCL1Q14515 664 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 TFDP3Q5H9I0 405 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 FNBP1LQ5T0N5 605 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 SYCP2LQ5T4T6 812 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 CDR2LQ86X02 465 aaPredicted RBP16.65■□□□□ 0.26
LDLR-204ENST00000545707 PLCD4Q9BRC7 762 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 NFASCO94856 1347 aa16.65■□□□□ 0.26
LDLR-204ENST00000545707 FER1L6Q2WGJ9 1857 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 TCRBV7S3A2A0A539 114 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 ALOX15BO15296 676 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 LDHAP00338 332 aaKnown RBP16.64■□□□□ 0.25
LDLR-204ENST00000545707 ASS1P00966 412 aaKnown RBP16.64■□□□□ 0.25
LDLR-204ENST00000545707 CD48P09326 243 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 CCNB1P14635 433 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 KRT4P19013 534 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 OSTNP61366 133 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 EN1Q05925 392 aaPredicted RBP16.64■□□□□ 0.25
LDLR-204ENST00000545707 GNPTABQ3T906 1256 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 ZNF449Q6P9G9 518 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 JOSD2Q8TAC2 188 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 ALG13Q9NP73 1137 aaKnown RBP16.64■□□□□ 0.25
LDLR-204ENST00000545707 HACL1Q9UJ83 578 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 C15orf41Q9Y2V0 281 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 MAFBQ9Y5Q3 323 aaPredicted RBP16.64■□□□□ 0.25
LDLR-204ENST00000545707 WDR81Q562E7 1941 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 PSME4Q14997 1843 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 IL1R2P27930 398 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 OTUD4Q01804 1114 aaKnown RBP16.64■□□□□ 0.25
LDLR-204ENST00000545707 MORF4L2Q15014 288 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 CCDC142Q17RM4 750 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 LVRNQ6Q4G3 990 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 CENPUQ71F23 418 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 KIAA0319LQ8IZA0 1049 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 RIBC1Q8N443 379 aaPredicted RBP16.64■□□□□ 0.25
LDLR-204ENST00000545707 ARFGAP1Q8N6T3 406 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 EMC1Q8N766 993 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 UBR7Q8N806 425 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 ZNF280CQ8ND82 737 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 ACTL9Q8TC94 416 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 KCNV2Q8TDN2 545 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 LRRC8CQ8TDW0 803 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 WRNIP1Q96S55 665 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 AGTPBP1Q9UPW5 1226 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 STARD13Q9Y3M8 1113 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 CLUHO75153 1309 aa16.64■□□□□ 0.25
LDLR-204ENST00000545707 PRPF4O43172 522 aaKnown RBP eCLIP16.63■□□□□ 0.256e-9■■□□□ 13.2
LDLR-204ENST00000545707 PIGRP01833 764 aa16.63■□□□□ 0.25
LDLR-204ENST00000545707 CALB1P05937 261 aa16.63■□□□□ 0.25
LDLR-204ENST00000545707 SRGAP2CP0DJJ0 459 aa16.63■□□□□ 0.25
LDLR-204ENST00000545707 PTPRAP18433 802 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms