RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 SLITRK6Q9H5Y7 841 aa9.16□□□□□ -0.94
USP28-215ENST00000545608 ASB7Q9H672 318 aa9.16□□□□□ -0.94
USP28-215ENST00000545608 LMAN1LQ9HAT1 526 aa9.16□□□□□ -0.94
USP28-215ENST00000545608 ZSCAN32Q9NX65 697 aa9.16□□□□□ -0.94
USP28-215ENST00000545608 FBXO2Q9UK22 296 aaPredicted RBP9.16□□□□□ -0.94
USP28-215ENST00000545608 AGO2Q9UKV8 859 aaKnown RBP9.16□□□□□ -0.94
USP28-215ENST00000545608 DERAQ9Y315 318 aa9.16□□□□□ -0.94
USP28-215ENST00000545608 PIAS3Q9Y6X2 628 aa9.16□□□□□ -0.94
USP28-215ENST00000545608 USP34Q70CQ2 3546 aa9.16□□□□□ -0.94
USP28-215ENST00000545608 F5P12259 2224 aa9.16□□□□□ -0.94
USP28-215ENST00000545608 OTOGLQ3ZCN5 2332 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 SPTBN4Q9H254 2564 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 MYMKA6NI61 221 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 CYB561D2O14569 222 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 LILRB5O75023 590 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 CHRNB1P11230 501 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 PAX3P23760 479 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 CCNE1P24864 410 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 GABRR2P28476 465 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 WNT7BP56706 349 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 KCNA1Q09470 495 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 SLC39A12Q504Y0 691 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 GPR158Q5T848 1215 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 WSCD1Q658N2 575 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 SCARA3Q6AZY7 606 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 SLFN12LQ6IEE8 588 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 ERMP1Q7Z2K6 904 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 LRRTM3Q86VH5 581 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 LAPTM4BQ86VI4 370 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 EFCAB13Q8IY85 973 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 ZSWIM2Q8NEG5 633 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 PSMG2Q969U7 264 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 E2F7Q96AV8 911 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 DNAJC19Q96DA6 116 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 CALR3Q96L12 384 aaKnown RBP9.15□□□□□ -0.94
USP28-215ENST00000545608 LPIN3Q9BQK8 851 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 PYM1Q9BRP8 204 aaKnown RBP9.15□□□□□ -0.94
USP28-215ENST00000545608 STRA6Q9BX79 667 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 ZCWPW1Q9H0M4 648 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 CHRDQ9H2X0 955 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 ATXN3LQ9H3M9 355 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 PRMT8Q9NR22 394 aaPredicted RBP9.15□□□□□ -0.94
USP28-215ENST00000545608 DPP3Q9NY33 737 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 TBC1D7Q9P0N9 293 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 C2CD2Q9Y426 696 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 ASB3Q9Y575 518 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 PCDHGA2Q9Y5H1 932 aa9.15□□□□□ -0.94
USP28-215ENST00000545608 SRPRBQ9Y5M8 271 aaKnown RBP9.15□□□□□ -0.94
USP28-215ENST00000545608 CHADO15335 359 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 TDGF1P13385 188 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 ATF6P18850 670 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 ABCD1P33897 745 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 SOX9P48436 509 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 TUFMP49411 452 aaKnown RBP9.14□□□□□ -0.95
USP28-215ENST00000545608 TAF6P49848 677 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 CYP4F8P98187 520 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 POU5F1Q01860 360 aaKnown RBP9.14□□□□□ -0.95
USP28-215ENST00000545608 CEBPZQ03701 1054 aaKnown RBP9.14□□□□□ -0.95
USP28-215ENST00000545608 FCHO2Q0JRZ9 810 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 RESTQ13127 1097 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 GAS6Q14393 721 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 MGAT5BQ3V5L5 792 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 WDR44Q5JSH3 913 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 RRAGBQ5VZM2 374 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 METTL23Q86XA0 190 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 YAF2Q8IY57 180 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 TTC8Q8TAM2 541 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 FAM200AQ8TCP9 573 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 CSGALNACT1Q8TDX6 532 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 GIPC2Q8TF65 315 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 POMGNT1Q8WZA1 660 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 ZFYVE19Q96K21 471 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 SEPT5Q99719 369 aaPredicted RBP9.14□□□□□ -0.95
USP28-215ENST00000545608 PANK2Q9BZ23 570 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 IL21Q9HBE4 155 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 HSFX1Q9UBD0 423 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 STK17AQ9UEE5 414 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 CCDC39Q9UFE4 941 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 PCDHGC3Q9UN70 934 aa9.14□□□□□ -0.95
USP28-215ENST00000545608 PDCD11Q14690 1871 aaKnown RBP9.14□□□□□ -0.95
USP28-215ENST00000545608 MYH11P35749 1972 aa9.13□□□□□ -0.95
USP28-215ENST00000545608 SLC38A8A6NNN8 435 aa9.13□□□□□ -0.95
USP28-215ENST00000545608 KPNA7A9QM74 516 aa9.13□□□□□ -0.95
USP28-215ENST00000545608 HAPLN1P10915 354 aaPredicted RBP9.13□□□□□ -0.95
USP28-215ENST00000545608 SYT1P21579 422 aa9.13□□□□□ -0.95
USP28-215ENST00000545608 CASP5P51878 434 aa9.13□□□□□ -0.95
USP28-215ENST00000545608 KPNA1P52294 538 aaPredicted RBP9.13□□□□□ -0.95
USP28-215ENST00000545608 MLLT6P55198 1093 aaPredicted RBP9.13□□□□□ -0.95
USP28-215ENST00000545608 SATB1Q01826 763 aa9.13□□□□□ -0.95
USP28-215ENST00000545608 GUCA2AQ02747 115 aa9.13□□□□□ -0.95
USP28-215ENST00000545608 POSTNQ15063 836 aa9.13□□□□□ -0.95
USP28-215ENST00000545608 L1TD1Q5T7N2 865 aaKnown RBP9.13□□□□□ -0.95
USP28-215ENST00000545608 TXNDC11Q6PKC3 985 aa9.13□□□□□ -0.95
USP28-215ENST00000545608 SV2BQ7L1I2 683 aa9.13□□□□□ -0.95
USP28-215ENST00000545608 ITIH5Q86UX2 942 aa9.13□□□□□ -0.95
USP28-215ENST00000545608 THEM5Q8N1Q8 247 aa9.13□□□□□ -0.95
USP28-215ENST00000545608 HVCN1Q96D96 273 aa9.13□□□□□ -0.95
USP28-215ENST00000545608 SAAL1Q96ER3 474 aa9.13□□□□□ -0.95
USP28-215ENST00000545608 FAM84AQ96KN4 292 aa9.13□□□□□ -0.95
USP28-215ENST00000545608 ACCSQ96QU6 501 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms