RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 GJC2Q5T442 439 aaPredicted RBP14.72□□□□□ -0.05
MSH2-206ENST00000543555 EPS8L3Q8TE67 593 aaKnown RBP14.72□□□□□ -0.05
MSH2-206ENST00000543555 SLITRK1Q96PX8 696 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 TSPYL1Q9H0U9 437 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 SIX4Q9UIU6 781 aa14.72□□□□□ -0.05
MSH2-206ENST00000543555 GMNCA6NCL1 334 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 F8VP50 259 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 PI4K2BG5E9Z4 385 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 AGTP01019 485 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 KRT1P04264 644 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 LGALS2P05162 132 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 NFICP08651 508 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 CDR1P51861 262 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 FAM187BQ17R55 369 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 C3orf20Q8ND61 904 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 TRAIPQ9BWF2 469 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 RAP1GAPP47736 663 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 ZNF667Q5HYK9 610 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 CYP4A22Q5TCH4 519 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 TAPT1Q6NXT6 567 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 DENND1BQ6P3S1 775 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 ZNF365Q70YC5 407 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 CCDC89Q8N998 374 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 C1orf127Q8N9H9 656 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 RAPGEF5Q92565 580 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 DDX23Q9BUQ8 820 aaKnown RBP14.71□□□□□ -0.05
MSH2-206ENST00000543555 BCO2Q9BYV7 579 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 ANAPC5Q9UJX4 755 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 PNMA3Q9UL41 463 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 IVNS1ABPQ9Y6Y0 642 aa14.71□□□□□ -0.05
MSH2-206ENST00000543555 ANK1P16157 1881 aa14.71□□□□□ -0.06
MSH2-206ENST00000543555 IGF2BP3O00425 579 aaKnown RBP eCLIP14.71□□□□□ -0.06
MSH2-206ENST00000543555 RASGRF2O14827 1237 aa14.71□□□□□ -0.06
MSH2-206ENST00000543555 KRT10P13645 584 aa14.71□□□□□ -0.06
MSH2-206ENST00000543555 VPS41P49754 854 aa14.71□□□□□ -0.06
MSH2-206ENST00000543555 PIGHQ14442 188 aaPredicted RBP14.71□□□□□ -0.06
MSH2-206ENST00000543555 AMHR2Q16671 573 aa14.71□□□□□ -0.06
MSH2-206ENST00000543555 ZFYVE27Q5T4F4 411 aa14.71□□□□□ -0.06
MSH2-206ENST00000543555 MFSD7Q6UXD7 560 aa14.71□□□□□ -0.06
MSH2-206ENST00000543555 LINC01465Q8N7H1 131 aa14.71□□□□□ -0.06
MSH2-206ENST00000543555 NIPA2Q8N8Q9 360 aa14.71□□□□□ -0.06
MSH2-206ENST00000543555 ROPN1BQ9BZX4 212 aaPredicted RBP14.71□□□□□ -0.06
MSH2-206ENST00000543555 ROPN1Q9HAT0 212 aaPredicted RBP14.71□□□□□ -0.06
MSH2-206ENST00000543555 STRIP2Q9ULQ0 834 aa14.71□□□□□ -0.06
MSH2-206ENST00000543555 A0A087WZ62 844 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 LACTBL1A8MY62 500 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 AOC2O75106 756 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 CSDE1O75534 798 aaKnown RBP14.7□□□□□ -0.06
MSH2-206ENST00000543555 STAG3L1P0CL83 205 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 MCF2P10911 925 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 CD19P15391 556 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 MMP13P45452 471 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 SLCO1A2P46721 670 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 IFI35P80217 286 aaPredicted RBP14.7□□□□□ -0.06
MSH2-206ENST00000543555 ZNF792Q3KQV3 632 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 WDR72Q3MJ13 1102 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 TNFAIP8L3Q5GJ75 292 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 RGMBQ6NW40 437 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 SPATS2Q86XZ4 545 aaKnown RBP14.7□□□□□ -0.06
MSH2-206ENST00000543555 IFNLR1Q8IU57 520 aaPredicted RBP14.7□□□□□ -0.06
MSH2-206ENST00000543555 SMC1BQ8NDV3 1235 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 MDM1Q8TC05 714 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 FDXACB1Q9BRP7 624 aaPredicted RBP14.7□□□□□ -0.06
MSH2-206ENST00000543555 LHX5Q9H2C1 402 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 CPA4Q9UI42 421 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 MAGEB2O15479 319 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 MEFVO15553 781 aaPredicted RBP14.7□□□□□ -0.06
MSH2-206ENST00000543555 MED7O43513 233 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 GH1P01241 217 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 IRX5P78411 483 aaPredicted RBP14.7□□□□□ -0.06
MSH2-206ENST00000543555 TNFAIP2Q03169 654 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 AUHQ13825 339 aaKnown RBP14.7□□□□□ -0.06
MSH2-206ENST00000543555 PTPN20Q4JDL3 420 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 KAZNQ674X7 775 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 MFSD5Q6N075 450 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 RASAL3Q86YV0 1011 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 BBOF1Q8ND07 529 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 GPRC5AQ8NFJ5 357 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 GTF3C2Q8WUA4 911 aaPredicted RBP14.7□□□□□ -0.06
MSH2-206ENST00000543555 CENPTQ96BT3 561 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 FAXDC2Q96IV6 333 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 STMN4Q9H169 189 aaPredicted RBP14.7□□□□□ -0.06
MSH2-206ENST00000543555 SDCBP2Q9H190 292 aa14.7□□□□□ -0.06
MSH2-206ENST00000543555 LIASO43766 372 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 TOMM70O94826 608 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 TJP3O95049 919 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 ACSL3O95573 720 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 ATF7P17544 494 aaPredicted RBP14.69□□□□□ -0.06
MSH2-206ENST00000543555 POLR2BP30876 1174 aaKnown RBP14.69□□□□□ -0.06
MSH2-206ENST00000543555 RAD23BP54727 409 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 CDH8P55286 799 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 TXNRD3NBQ6F5E7 133 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 JADE1Q6IE81 842 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 MAMDC4Q6UXC1 1216 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 SPOCD1Q6ZMY3 1216 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 ADAM7Q9H2U9 754 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 PDZD7Q9H5P4 517 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 VTA1Q9NP79 307 aa14.69□□□□□ -0.06
MSH2-206ENST00000543555 ATXN2Q99700 1313 aaKnown RBP14.69□□□□□ -0.06
MSH2-206ENST00000543555 ITGB3P05106 788 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms