RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 EXTL3O43909 919 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 PPP6R2O75170 966 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 PRAMEF12O95522 483 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 LDHAP00338 332 aaKnown RBP12.99□□□□□ -0.33
PTPN6-220ENST00000543115 HAPLN1P10915 354 aaPredicted RBP12.99□□□□□ -0.33
PTPN6-220ENST00000543115 CCNE1P24864 410 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 HOXD13P35453 343 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 GPR15P49685 360 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 CCDC142Q17RM4 750 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 WDR44Q5JSH3 913 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 FOXD4L5Q5VV16 416 aaPredicted RBP12.99□□□□□ -0.33
PTPN6-220ENST00000543115 LMBRD2Q68DH5 695 aaPredicted RBP12.99□□□□□ -0.33
PTPN6-220ENST00000543115 SHC4Q6S5L8 630 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 DCLK2Q8N568 766 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 NOC3LQ8WTT2 800 aaKnown RBP12.99□□□□□ -0.33
PTPN6-220ENST00000543115 FOXD4L4Q8WXT5 416 aaPredicted RBP12.99□□□□□ -0.33
PTPN6-220ENST00000543115 NELL1Q92832 810 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 E2F7Q96AV8 911 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 ZFYVE19Q96K21 471 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 TRIM9Q9C026 710 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 MTMR12Q9C0I1 747 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 CHRDQ9H2X0 955 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 LMAN1LQ9HAT1 526 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 PRMT8Q9NR22 394 aaPredicted RBP12.99□□□□□ -0.33
PTPN6-220ENST00000543115 KBTBD4Q9NVX7 518 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 SIX4Q9UIU6 781 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 SCN1AP35498 2009 aa12.99□□□□□ -0.33
PTPN6-220ENST00000543115 TICRRQ7Z2Z1 1910 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 KINO60870 393 aaKnown RBP12.98□□□□□ -0.33
PTPN6-220ENST00000543115 CHRNB1P11230 501 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 HMGA1P17096 107 aaKnown RBP12.98□□□□□ -0.33
PTPN6-220ENST00000543115 ACAT1P24752 427 aaKnown RBP12.98□□□□□ -0.33
PTPN6-220ENST00000543115 PNPLA4P41247 253 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 BFSP1Q12934 665 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 GAS6Q14393 721 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 VEPH1Q14D04 833 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 SDHAF4Q5VUM1 108 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 TXNDC11Q6PKC3 985 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 TMEM150AQ86TG1 271 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 OSTM1Q86WC4 334 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 CCDC65Q8IXS2 484 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 YAF2Q8IY57 180 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 DCP1BQ8IZD4 617 aaKnown RBP12.98□□□□□ -0.33
PTPN6-220ENST00000543115 GPD1LQ8N335 351 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 CSGALNACT2Q8N6G5 542 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 ZBTB44Q8NCP5 570 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 TTC8Q8TAM2 541 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 C2orf15Q8WU43 125 aaKnown RBP12.98□□□□□ -0.33
PTPN6-220ENST00000543115 DHX58Q96C10 678 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 PI4K2AQ9BTU6 479 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 SLC46A2Q9BY10 475 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 SMG9Q9H0W8 520 aaKnown RBP12.98□□□□□ -0.33
PTPN6-220ENST00000543115 TNMDQ9H2S6 317 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 TASP1Q9H6P5 420 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 TMEM206Q9H813 350 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 DDX43Q9NXZ2 648 aaKnown RBP12.98□□□□□ -0.33
PTPN6-220ENST00000543115 GTSE1Q9NYZ3 720 aa12.98□□□□□ -0.33
PTPN6-220ENST00000543115 FGF19O95750 216 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 F11P03951 625 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 KRT19P08727 400 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 TDGF1P13385 188 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 CASP1P29466 404 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 CDC25CP30307 473 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 TNK2Q07912 1038 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 SMARCB1Q12824 385 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 FOXD4L6Q3SYB3 417 aaPredicted RBP12.97□□□□□ -0.33
PTPN6-220ENST00000543115 ARHGAP15Q53QZ3 475 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 INTS6LQ5JSJ4 861 aaKnown RBP12.97□□□□□ -0.33
PTPN6-220ENST00000543115 FOXD4L3Q6VB84 417 aaPredicted RBP12.97□□□□□ -0.33
PTPN6-220ENST00000543115 CBWD2Q8IUF1 395 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 KIAA2013Q8IYS2 634 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 LRRC52Q8N7C0 313 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 OR5B17Q8NGF7 314 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 CSGALNACT1Q8TDX6 532 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 CACTINQ8WUQ7 758 aaKnown RBP12.97□□□□□ -0.33
PTPN6-220ENST00000543115 SNX21Q969T3 373 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 ZNF396Q96N95 335 aaPredicted RBP12.97□□□□□ -0.33
PTPN6-220ENST00000543115 PKMYT1Q99640 499 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 RBM12Q9NTZ6 932 aaKnown RBP12.97□□□□□ -0.33
PTPN6-220ENST00000543115 INTS13Q9NVM9 706 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 ZSCAN32Q9NX65 697 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 GDAP2Q9NXN4 497 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 OBP2AQ9NY56 170 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 ITGA11Q9UKX5 1188 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 PCDHB5Q9Y5E4 795 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 PCDHGA2Q9Y5H1 932 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 SNX9Q9Y5X1 595 aa12.97□□□□□ -0.33
PTPN6-220ENST00000543115 MYBPHLA2RUH7 354 aa12.96□□□□□ -0.33
PTPN6-220ENST00000543115 SPECC1L-ADORA2AF8WAN1 911 aa12.96□□□□□ -0.33
PTPN6-220ENST00000543115 DPYSL4O14531 572 aa12.96□□□□□ -0.33
PTPN6-220ENST00000543115 CUTAO60888 179 aa12.96□□□□□ -0.33
PTPN6-220ENST00000543115 HUS1O60921 280 aa12.96□□□□□ -0.33
PTPN6-220ENST00000543115 LILRB5O75023 590 aa12.96□□□□□ -0.33
PTPN6-220ENST00000543115 PRPF40AO75400 957 aaKnown RBP12.96□□□□□ -0.33
PTPN6-220ENST00000543115 YEATS4O95619 227 aa12.96□□□□□ -0.33
PTPN6-220ENST00000543115 TMEM191BP0C7N4 346 aa12.96□□□□□ -0.33
PTPN6-220ENST00000543115 CYP2F1P24903 491 aa12.96□□□□□ -0.33
PTPN6-220ENST00000543115 WEE1P30291 646 aa12.96□□□□□ -0.33
PTPN6-220ENST00000543115 CTHP32929 405 aa12.96□□□□□ -0.33
PTPN6-220ENST00000543115 ID4P47928 161 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms