RNA–Protein interactions for RNA: ENST00000543044.2

AP003108.2-208, humanhuman

TSL 3 BASIC

Gene AP003108.2, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003108.2-208ENST00000543044 PNPLA4P41247 253 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 ATXN1P54253 815 aaKnown RBP9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 PTPAQ15257 358 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 SV2CQ496J9 727 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 WDR44Q5JSH3 913 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 WSCD1Q658N2 575 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 TXNDC11Q6PKC3 985 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 CRELD2Q6UXH1 353 aaPredicted RBP9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 LRRTM3Q86VH5 581 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 LONP2Q86WA8 852 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 DCP1BQ8IZD4 617 aaKnown RBP9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 SYNPOQ8N3V7 929 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 POMGNT1Q8WZA1 660 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 EPSTI1Q96J88 318 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 ZFYVE19Q96K21 471 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 STRA6Q9BX79 667 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 SLC46A2Q9BY10 475 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 PARD6AQ9NPB6 346 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 RBM12Q9NTZ6 932 aaKnown RBP9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 STK17AQ9UEE5 414 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 CCDC39Q9UFE4 941 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 MYH11P35749 1972 aa9.64□□□□□ -0.87
AP003108.2-208ENST00000543044 SOBPA7XYQ1 873 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 CHURC1-FNTBB4DL54 471 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 K7ESF4 209 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 HRO43593 1189 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 GAP43P17677 238 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 DDX6P26196 483 aaKnown RBP eCLIP9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 FNTBP49356 437 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 CYP4F8P98187 520 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 TNK2Q07912 1038 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 CCINQ13939 588 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 SIM2Q14190 667 aaPredicted RBP9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 PON2Q15165 354 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 LPAL2Q16609 132 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 NFE2Q16621 373 aaPredicted RBP9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 ITPRIPL2Q3MIP1 535 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 PRR23BQ6ZRT6 265 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 Q6ZS52 159 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 USP49Q70CQ1 688 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 DYMQ7RTS9 669 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 SFR1Q86XK3 245 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 EFCAB13Q8IY85 973 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 CMTM8Q8IZV2 173 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 TTC8Q8TAM2 541 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 GIPC2Q8TF65 315 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 ZNF560Q96MR9 790 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 RTKNQ9BST9 563 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 MRPL44Q9H9J2 332 aaKnown RBP9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 ABI2Q9NYB9 513 aaPredicted RBP9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 EXOC7Q9UPT5 735 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 PCDHB5Q9Y5E4 795 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 SRPRBQ9Y5M8 271 aaKnown RBP9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 NCOR2Q9Y618 2525 aa9.63□□□□□ -0.87
AP003108.2-208ENST00000543044 TICRRQ7Z2Z1 1910 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 LDHAP00338 332 aaKnown RBP9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 F11P03951 625 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 HMGA1P17096 107 aaKnown RBP9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 PDCP20941 246 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 AVPR1AP37288 418 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 TXLNAP40222 546 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 CDR1P51861 262 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 NLRP12P59046 1061 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 TSPY1Q01534 308 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 DMWDQ09019 674 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 KCNA1Q09470 495 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 SPEM2Q0P670 501 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 L1TD1Q5T7N2 865 aaKnown RBP9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 RRAGBQ5VZM2 374 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 SV2BQ7L1I2 683 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 TMEM150AQ86TG1 271 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 CACTINQ8WUQ7 758 aaKnown RBP9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 LEO1Q8WVC0 666 aaPredicted RBP9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 DNAJC19Q96DA6 116 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 ACCSQ96QU6 501 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 FAM83CQ9BQN1 747 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 ACBD6Q9BR61 282 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 FAM213AQ9BRX8 229 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 SMG9Q9H0W8 520 aaKnown RBP9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 IKZF4Q9H2S9 585 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 KIF9Q9HAQ2 790 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 OLFML3Q9NRN5 406 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 GKN1Q9NS71 199 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 FBXO2Q9UK22 296 aaPredicted RBP9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 PCDHB13Q9Y5F0 798 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 CLIC4Q9Y696 253 aa9.62□□□□□ -0.87
AP003108.2-208ENST00000543044 VPS37CA5D8V6 355 aaPredicted RBP9.61□□□□□ -0.87
AP003108.2-208ENST00000543044 MYMKA6NI61 221 aa9.61□□□□□ -0.87
AP003108.2-208ENST00000543044 FOXD2O60548 495 aaPredicted RBP9.61□□□□□ -0.87
AP003108.2-208ENST00000543044 HUS1O60921 280 aa9.61□□□□□ -0.87
AP003108.2-208ENST00000543044 PRPF40AO75400 957 aaKnown RBP9.61□□□□□ -0.87
AP003108.2-208ENST00000543044 GCNT3O95395 438 aa9.61□□□□□ -0.87
AP003108.2-208ENST00000543044 ITGB3P05106 788 aa9.61□□□□□ -0.87
AP003108.2-208ENST00000543044 CSH1P0DML2 217 aa9.61□□□□□ -0.87
AP003108.2-208ENST00000543044 CSH2P0DML3 217 aa9.61□□□□□ -0.87
AP003108.2-208ENST00000543044 GARTP22102 1010 aa9.61□□□□□ -0.87
AP003108.2-208ENST00000543044 POLR2BP30876 1174 aaKnown RBP9.61□□□□□ -0.87
AP003108.2-208ENST00000543044 TFAMQ00059 246 aaKnown RBP9.61□□□□□ -0.87
AP003108.2-208ENST00000543044 AMPD2Q01433 879 aa9.61□□□□□ -0.87
AP003108.2-208ENST00000543044 GRSF1Q12849 480 aaKnown RBP eCLIP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms