RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 HVCN1Q96D96 273 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 SEPT5Q99719 369 aaPredicted RBP12.81□□□□□ -0.36
PTPN6-219ENST00000542848 PYM1Q9BRP8 204 aaKnown RBP12.81□□□□□ -0.36
PTPN6-219ENST00000542848 IL21Q9HBE4 155 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 CCDC39Q9UFE4 941 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 PTPRDP23468 1912 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 TPRP12270 2363 aaKnown RBP12.81□□□□□ -0.36
PTPN6-219ENST00000542848 KIAA1549LQ6ZVL6 1849 aa12.81□□□□□ -0.36
PTPN6-219ENST00000542848 SOBPA7XYQ1 873 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 KPNA7A9QM74 516 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 TISP43B9A030 160 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 LRP3O75074 770 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 PPP1R37O75864 691 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 HAPLN1P10915 354 aaPredicted RBP12.8□□□□□ -0.36
PTPN6-219ENST00000542848 ATF6P18850 670 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 CTHP32929 405 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 SOX9P48436 509 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 ATXN1P54253 815 aaKnown RBP12.8□□□□□ -0.36
PTPN6-219ENST00000542848 PTPAQ15257 358 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 TAF12Q16514 161 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 CRELD2Q6UXH1 353 aaPredicted RBP12.8□□□□□ -0.36
PTPN6-219ENST00000542848 LRRTM3Q86VH5 581 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 DCP1BQ8IZD4 617 aaKnown RBP12.8□□□□□ -0.36
PTPN6-219ENST00000542848 BPIFB1Q8TDL5 484 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 POMGNT1Q8WZA1 660 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 EPSTI1Q96J88 318 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 GCNAQ96QF7 691 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 LPIN3Q9BQK8 851 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 STRA6Q9BX79 667 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 THG1LQ9NWX6 298 aaKnown RBP12.8□□□□□ -0.36
PTPN6-219ENST00000542848 GTSE1Q9NYZ3 720 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 SEL1LQ9UBV2 794 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 STK17AQ9UEE5 414 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 USP18Q9UMW8 372 aa12.8□□□□□ -0.36
PTPN6-219ENST00000542848 K7ESF4 209 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 RETP07949 1114 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 GAP43P17677 238 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 ADSSP30520 456 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 HOXA6P31267 233 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 PNPLA4P41247 253 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 ITPRIPL2Q3MIP1 535 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 SV2CQ496J9 727 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 WDR44Q5JSH3 913 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 WSCD1Q658N2 575 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 TXNDC11Q6PKC3 985 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 USP49Q70CQ1 688 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 DYMQ7RTS9 669 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 LONP2Q86WA8 852 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 SFR1Q86XK3 245 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 EFCAB13Q8IY85 973 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 ZFYVE19Q96K21 471 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 ZNF560Q96MR9 790 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 RTKNQ9BST9 563 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 SLC46A2Q9BY10 475 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 MRPL44Q9H9J2 332 aaKnown RBP12.79□□□□□ -0.36
PTPN6-219ENST00000542848 PARD6AQ9NPB6 346 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 RBM12Q9NTZ6 932 aaKnown RBP12.79□□□□□ -0.36
PTPN6-219ENST00000542848 CDV3Q9UKY7 258 aaKnown RBP12.79□□□□□ -0.36
PTPN6-219ENST00000542848 EXOC7Q9UPT5 735 aa12.79□□□□□ -0.36
PTPN6-219ENST00000542848 CNOT1A5YKK6 2376 aaKnown RBP12.79□□□□□ -0.36
PTPN6-219ENST00000542848 NUP205Q92621 2012 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 CHURC1-FNTBB4DL54 471 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 HRO43593 1189 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 PRAMEF12O95522 483 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 LDHAP00338 332 aaKnown RBP12.78□□□□□ -0.36
PTPN6-219ENST00000542848 F11P03951 625 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 PDCP20941 246 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 DDX6P26196 483 aaKnown RBP eCLIP12.78□□□□□ -0.36
PTPN6-219ENST00000542848 FNTBP49356 437 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 CYP4F8P98187 520 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 SPEM2Q0P670 501 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 CCINQ13939 588 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 SIM2Q14190 667 aaPredicted RBP12.78□□□□□ -0.36
PTPN6-219ENST00000542848 PON2Q15165 354 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 NFE2Q16621 373 aaPredicted RBP12.78□□□□□ -0.36
PTPN6-219ENST00000542848 RRAGBQ5VZM2 374 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 PRR23BQ6ZRT6 265 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 SV2BQ7L1I2 683 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 CMTM8Q8IZV2 173 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 TTC8Q8TAM2 541 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 GIPC2Q8TF65 315 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 CACTINQ8WUQ7 758 aaKnown RBP12.78□□□□□ -0.36
PTPN6-219ENST00000542848 DNAJC19Q96DA6 116 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 ACCSQ96QU6 501 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 PCDHB5Q9Y5E4 795 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 SRPRBQ9Y5M8 271 aaKnown RBP12.78□□□□□ -0.36
PTPN6-219ENST00000542848 CLIC4Q9Y696 253 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 MYH10P35580 1976 aa12.78□□□□□ -0.36
PTPN6-219ENST00000542848 MYOFQ9NZM1 2061 aa12.77□□□□□ -0.36
PTPN6-219ENST00000542848 CACNA1BQ00975 2339 aa12.77□□□□□ -0.36
PTPN6-219ENST00000542848 HMGA1P17096 107 aaKnown RBP12.77□□□□□ -0.37
PTPN6-219ENST00000542848 AVPR1AP37288 418 aa12.77□□□□□ -0.37
PTPN6-219ENST00000542848 NLRP12P59046 1061 aa12.77□□□□□ -0.37
PTPN6-219ENST00000542848 TSPY1Q01534 308 aa12.77□□□□□ -0.37
PTPN6-219ENST00000542848 TNK2Q07912 1038 aa12.77□□□□□ -0.37
PTPN6-219ENST00000542848 CUL4AQ13619 759 aa12.77□□□□□ -0.37
PTPN6-219ENST00000542848 BECN1Q14457 450 aa12.77□□□□□ -0.37
PTPN6-219ENST00000542848 LPAL2Q16609 132 aa12.77□□□□□ -0.37
PTPN6-219ENST00000542848 L1TD1Q5T7N2 865 aaKnown RBP12.77□□□□□ -0.37
PTPN6-219ENST00000542848 Q6ZS52 159 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms