RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 EFCC1Q9HA90 598 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 EURLQ9NYK6 297 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 CAPN7Q9Y6W3 813 aa6.92□□□□□ -1.3
PTPRO-208ENST00000542557 hCG_1818297A0A087WSY0 165 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 SPDYE5A6NIY4 337 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 MED7O43513 233 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 PEX10O60683 326 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 CDH16O75309 829 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 GJB6O95452 261 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 SRGAP2CP0DJJ0 459 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 POLR2BP30876 1174 aaKnown RBP6.91□□□□□ -1.3
PTPRO-208ENST00000542557 OGDHQ02218 1023 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 TRIP13Q15645 432 aaPredicted RBP6.91□□□□□ -1.3
PTPRO-208ENST00000542557 OASLQ15646 514 aaKnown RBP6.91□□□□□ -1.3
PTPRO-208ENST00000542557 KYNUQ16719 465 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 HSDL1Q3SXM5 330 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 ANKRD20A8PQ5CZ79 823 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 SCARA3Q6AZY7 606 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 CCDC62Q6P9F0 684 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 DCUN1D2Q6PH85 259 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 MFSD7Q6UXD7 560 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 ERICH1Q86X53 443 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 ERO1BQ86YB8 467 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 WDTC1Q8N5D0 677 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 ANKS4BQ8N8V4 417 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 TTC25Q96NG3 672 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 CCDC77Q9BR77 488 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 SMARCAD1Q9H4L7 1026 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 ADARB2Q9NS39 739 aaKnown RBP6.91□□□□□ -1.3
PTPRO-208ENST00000542557 AGTPBP1Q9UPW5 1226 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 KCNH4Q9UQ05 1017 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 TNFSF13BQ9Y275 285 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 GOLGA6L7A0A1B0GV03 622 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 HBP1O60381 514 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 ITGAVP06756 1048 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 MARK3P27448 753 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 SSTR3P32745 418 aaPredicted RBP6.91□□□□□ -1.3
PTPRO-208ENST00000542557 GJC1P36383 396 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 CDKN2BP42772 138 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 SSR1P43307 286 aaKnown RBP6.91□□□□□ -1.3
PTPRO-208ENST00000542557 VCPP55072 806 aaKnown RBP6.91□□□□□ -1.3
PTPRO-208ENST00000542557 TFAMQ00059 246 aaKnown RBP6.91□□□□□ -1.3
PTPRO-208ENST00000542557 MBTD1Q05BQ5 628 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 POU5F1BQ06416 359 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 MORF4L2Q15014 288 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 FAM187BQ17R55 369 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 TFDP3Q5H9I0 405 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 VSTM1Q6UX27 236 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 GSTA5Q7RTV2 222 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 APBB1IPQ7Z5R6 666 aaPredicted RBP6.91□□□□□ -1.3
PTPRO-208ENST00000542557 TRIM50Q86XT4 487 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 SUGP1Q8IWZ8 645 aaKnown RBP6.91□□□□□ -1.3
PTPRO-208ENST00000542557 CCDC13Q8IYE1 715 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 LRRC71Q8N4P6 559 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 TFAP2BQ92481 460 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 CCT6BQ92526 530 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 PRMT1Q99873 361 aaKnown RBP6.91□□□□□ -1.3
PTPRO-208ENST00000542557 CDT1Q9H211 546 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 FAM124BQ9H5Z6 455 aaPredicted RBP6.91□□□□□ -1.3
PTPRO-208ENST00000542557 VRTNQ9H8Y1 702 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 PCDH9Q9HC56 1237 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 SAMD15Q9P1V8 674 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 WDR35Q9P2L0 1181 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 DNPEPQ9ULA0 475 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 SHOC2Q9UQ13 582 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 IVNS1ABPQ9Y6Y0 642 aa6.91□□□□□ -1.3
PTPRO-208ENST00000542557 TMEM120BA0PK00 339 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 F8VP50 259 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 H0YHG0 523 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 GSTA1P08263 222 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 TCF4P15884 667 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 VPS41P49754 854 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 LACTBP83111 547 aaPredicted RBP6.9□□□□□ -1.3
PTPRO-208ENST00000542557 TAZQ16635 292 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 CCDC142Q17RM4 750 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 P3H1Q32P28 736 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 TDRPQ86YL5 185 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 RHPN2Q8IUC4 686 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 SULF1Q8IWU6 871 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 LRRC34Q8IZ02 419 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 SLC35B2Q8TB61 432 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 CFAP57Q96MR6 1250 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 SPATA33Q96N06 139 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 PPCSQ9HAB8 311 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 PRMT7Q9NVM4 692 aaPredicted RBP6.9□□□□□ -1.3
PTPRO-208ENST00000542557 SBF1O95248 1867 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 MGAMO43451 1857 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 SIGLEC16A6NMB1 481 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 PI4K2BG5E9Z4 385 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 C22orf31O95567 290 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 OAS1P00973 400 aaKnown RBP6.9□□□□□ -1.3
PTPRO-208ENST00000542557 KRT7P08729 469 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 WEE2P0C1S8 567 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 KRT10P13645 584 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 ATF7P17544 494 aaPredicted RBP6.9□□□□□ -1.3
PTPRO-208ENST00000542557 MAGEA4P43358 317 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 SLC25A11Q02978 314 aaKnown RBP6.9□□□□□ -1.3
PTPRO-208ENST00000542557 TNFAIP2Q03169 654 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 NR1H3Q13133 447 aa6.9□□□□□ -1.3
PTPRO-208ENST00000542557 PPIL2Q13356 520 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms