RNA–Protein interactions for RNA: ENST00000542264.1

ARAP1-215, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, human

TSL 3

Gene ARAP1, Length 271 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARAP1-215	ENST00000542264	CFAP47	Q6ZTR5	3102 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	VPS37C	A5D8V6	355 aa	Predicted RBP	11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	FOXD2	O60548	495 aa	Predicted RBP	11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	LRP3	O75074	770 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	SOAT2	O75908	522 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	RET	P07949	1114 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	DDX6	P26196	483 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	ADSS	P30520	456 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	CTH	P32929	405 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	CUL4A	Q13619	759 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	ALCAM	Q13740	583 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	ITPRIPL2	Q3MIP1	535 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	WSCD1	Q658N2	575 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	LRRTM3	Q86VH5	581 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	SFR1	Q86XK3	245 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	SYCP3	Q8IZU3	236 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	CMTM8	Q8IZV2	173 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	TTC9B	Q8N6N2	239 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	EXOC4	Q96A65	974 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	ZNF560	Q96MR9	790 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	LRRC3B	Q96PB8	259 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	ACBD6	Q9BR61	282 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	FAM213A	Q9BRX8	229 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	MKNK1	Q9BUB5	465 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	STRA6	Q9BX79	667 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	SLC46A2	Q9BY10	475 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	GKN1	Q9NS71	199 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	CLIC4	Q9Y696	253 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	NCOR2	Q9Y618	2525 aa		11.47	□□□□□ -0.57
ARAP1-215	ENST00000542264	TULP1	O00294	542 aa	Predicted RBP	11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	HUS1	O60921	280 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	ATG13	O75143	517 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	PPP1R37	O75864	691 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	CSH1	P0DML2	217 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	CSH2	P0DML3	217 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	GART	P22102	1010 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	AVPR1A	P37288	418 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	RPL10A	P62906	217 aa	Known RBP	11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	RBP5	P82980	135 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	TFAM	Q00059	246 aa	Known RBP	11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	SATB1	Q01826	763 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	SIM2	Q14190	667 aa	Predicted RBP	11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	STXBP5	Q5T5C0	1151 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	L1TD1	Q5T7N2	865 aa	Known RBP	11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	USP49	Q70CQ1	688 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	LONP2	Q86WA8	852 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	TMEM86A	Q8N2M4	240 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	CSGALNACT2	Q8N6G5	542 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	LRRC52	Q8N7C0	313 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	SPATA18	Q8TC71	538 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	GIPC2	Q8TF65	315 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	MRPS31	Q92665	395 aa	Known RBP	11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	LPIN3	Q9BQK8	851 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	LRRC27	Q9C0I9	530 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	TMEM206	Q9H813	350 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	IL21	Q9HBE4	155 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	ABCB6	Q9NP58	842 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	OLFML3	Q9NRN5	406 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	ABI2	Q9NYB9	513 aa	Predicted RBP	11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	GTSE1	Q9NYZ3	720 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	CDV3	Q9UKY7	258 aa	Known RBP	11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	USP18	Q9UMW8	372 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	AGAP1	Q9UPQ3	857 aa		11.46	□□□□□ -0.57
ARAP1-215	ENST00000542264	TRIP11	Q15643	1979 aa		11.46	□□□□□ -0.58
ARAP1-215	ENST00000542264	MYMK	A6NI61	221 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	TISP43	B9A030	160 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	KIAA0391	O15091	583 aa	Known RBP	11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	HR	O43593	1189 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	PRPF40A	O75400	957 aa	Known RBP	11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	GCNT3	O95395	438 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	IDE	P14735	1019 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	ATF6	P18850	670 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	TGM1	P22735	817 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	SOX9	P48436	509 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	LHX1	P48742	406 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	ATXN1	P54253	815 aa	Known RBP	11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	NLRP12	P59046	1061 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	MYL7	Q01449	175 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	GRSF1	Q12849	480 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	BFSP1	Q12934	665 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	GAS6	Q14393	721 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	TXNDC11	Q6PKC3	985 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	PRR23B	Q6ZRT6	265 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	STXBP4	Q6ZWJ1	553 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	MON1A	Q86VX9	555 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	DNAJC19	Q96DA6	116 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	ZFYVE19	Q96K21	471 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	FAM83C	Q9BQN1	747 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	RTKN	Q9BST9	563 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	TDP1	Q9NUW8	608 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	GDAP2	Q9NXN4	497 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	RBAK	Q9NYW8	714 aa	Predicted RBP	11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	UXT	Q9UBK9	157 aa	Predicted RBP	11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	FBXO2	Q9UK22	296 aa	Predicted RBP	11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	ITGA11	Q9UKX5	1188 aa		11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.45	□□□□□ -0.58
ARAP1-215	ENST00000542264	NCAN	O14594	1321 aa		11.44	□□□□□ -0.58

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