RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 SFNP31947 248 aa15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 ATN1P54259 1190 aaPredicted RBP15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 CAPN12Q6ZSI9 719 aa15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 RHOT2Q8IXI1 618 aa15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 WNT8BQ93098 351 aa15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 FIZ1Q96SL8 496 aa15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 TRIM7Q9C029 511 aa15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 GGA2Q9UJY4 613 aa15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 MTUS1Q9ULD2 1270 aa15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 MYH11P35749 1972 aa15.16■□□□□ 0.02
SFSWAP-210ENST00000541286 C5orf60A6NFR6 353 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 IGHA2P01877 340 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 POU5F1Q01860 360 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 KCNA10Q16322 511 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 HP1BP3Q5SSJ5 553 aaPredicted RBP15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 EMC10Q5UCC4 262 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 HAUS6Q7Z4H7 955 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 C4orf19Q8IY42 314 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 MAGEC3Q8TD91 643 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 ATP6V0A1Q93050 837 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 NLRP4Q96MN2 994 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 ZSWIM1Q9BR11 485 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 CDHR5Q9HBB8 845 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 USTQ9Y2C2 406 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 PHF2O75151 1096 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 PPFIA2O75334 1257 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 AKR1A1P14550 325 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 LAMC2Q13753 1193 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 RNF220Q5VTB9 566 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 IQSEC1Q6DN90 963 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 XXYLT1Q8NBI6 393 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 PPTC7Q8NI37 304 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 TSC22D3Q99576 134 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 CTNNAL1Q9UBT7 734 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 SLC12A4Q9UP95 1085 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 IGKV6D-21A0A0A0MT36 114 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 TREHO43280 583 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 ASGR1P07306 291 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 ATP2A2P16615 1042 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 ZDHHC24Q6UX98 284 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 RHPN2Q8IUC4 686 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 MKNK1Q9BUB5 465 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 RNF208Q9H0X6 261 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 ZDHHC18Q9NUE0 388 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 ADAM22Q9P0K1 906 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 STK24Q9Y6E0 443 aa15.15■□□□□ 0.02
SFSWAP-210ENST00000541286 KLHL33A6NCF5 533 aa15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 EIF3BP55884 814 aaKnown RBP15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 EMC2Q15006 297 aa15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 SGO2Q562F6 1265 aa15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 SLC30A9Q6PML9 568 aa15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 INTS8Q75QN2 995 aaKnown RBP15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 PRUNE1Q86TP1 453 aa15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 POLR3FQ9H1D9 316 aaPredicted RBP15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 PAPOLBQ9NRJ5 636 aaKnown RBP15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 RBM47A0AV96 593 aaKnown RBP15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 CTSHP09668 335 aa15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 MSH2P43246 934 aa15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 RANBP1P43487 201 aa15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 PASD1Q8IV76 773 aa15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 OLIG1Q8TAK6 271 aa15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 PLEKHO2Q8TD55 490 aa15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 BICD1Q96G01 975 aa15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 AP5M1Q9H0R1 490 aa15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 NENFQ9UMX5 172 aa15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 NCANO14594 1321 aa15.14■□□□□ 0.01
SFSWAP-210ENST00000541286 LRRIQ4A6NIV6 560 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 SEPT4O43236 478 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 HMGCRP04035 888 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 RARBP10826 455 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 HSPA8P11142 646 aaKnown RBP15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 HARSP12081 509 aaKnown RBP15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 PECAM1P16284 738 aaPredicted RBP15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 MARCH8Q5T0T0 291 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 FITM2Q8N6M3 262 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 PRPF31Q8WWY3 499 aaKnown RBP15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 ACCSQ96QU6 501 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 TMEM117Q9H0C3 514 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 ADAM7Q9H2U9 754 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 MINDY3Q9H8M7 445 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 ETNK1Q9HBU6 452 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 ANAPC7Q9UJX3 599 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 ANXA13P27216 316 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 CHRNA3P32297 505 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 DHX34Q14147 1143 aaKnown RBP15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 DGKDQ16760 1214 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 XKR3Q5GH77 459 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 EFCAB12Q6NXP0 572 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 DIS3LQ8TF46 1054 aaKnown RBP15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 ATXN2LQ8WWM7 1075 aaKnown RBP15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 CPA5Q8WXQ8 436 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 NAF1Q96HR8 494 aaKnown RBP15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 TRMT13Q9NUP7 481 aaKnown RBP15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 ZFATQ9P243 1243 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 SEL1LQ9UBV2 794 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 FAM187AA6NFU0 413 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 ECEL1O95672 775 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 ADRB2P07550 413 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 IQCF3P0C7M6 154 aa15.13■□□□□ 0.01
SFSWAP-210ENST00000541286 KYNUQ16719 465 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms