RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 SKAP2O75563 359 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 ALDH5A1P51649 535 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 HSD17B4P51659 736 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 TATDN2Q93075 761 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 EGFL8Q99944 293 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 ADGRB3O60242 1522 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 DLC1Q96QB1 1528 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 TULP4Q9NRJ4 1543 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 DDR1Q08345 913 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 TUBGCP3Q96CW5 907 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 CYP39A1Q9NYL5 469 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 APPL1Q9UKG1 709 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 F5H423 210 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 MTSS1O43312 755 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 RASSF9O75901 435 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 FCGR1AP12314 374 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 TCN1P20061 433 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 CCDC85BQ15834 202 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 MEA1Q16626 185 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 THEM5Q8N1Q8 247 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 PTPRN2Q92932 1015 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 ZNF341Q9BYN7 854 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 DBNDD1Q9H9R9 158 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 RNPEPL1Q9HAU8 725 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 RIC8BQ9NVN3 520 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 PCDHGB4Q9UN71 923 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 SUGT1Q9Y2Z0 365 aa15.6■□□□□ 0.09
SMARCA4-207ENST00000541122 ALKQ9UM73 1620 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 CRKP46108 304 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 PDK1Q15118 436 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 CCNG2Q16589 344 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 PCNX4Q63HM2 1172 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 SWSAP1Q6NVH7 229 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 MPP4Q96JB8 637 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 FAM84BQ96KN1 310 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 KLHL25Q9H0H3 589 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 MTMR4Q9NYA4 1195 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 SOX13Q9UN79 622 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 TNPO2O14787 897 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 ATMINO43313 823 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 FDFT1P37268 417 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 RFX5P48382 616 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 SLC10A5Q5PT55 438 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 RPL26L1Q9UNX3 145 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 LIN7AO14910 233 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 RGS2P41220 211 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 TPI1P60174 286 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 ERVK-9P63128 1117 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 ROR2Q01974 943 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 NCOA4Q13772 614 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 CCDC103Q8IW40 242 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 MARCH10Q8NA82 808 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 ZNF560Q96MR9 790 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 PAFAH2Q99487 392 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 ZNF184Q99676 751 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 SP110Q9HB58 689 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 SENP2Q9HC62 589 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 TOB1P50616 345 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 P3H2Q8IVL5 708 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 OTUB1Q96FW1 271 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 ZNF556Q9HAH1 456 aa15.59■□□□□ 0.09
SMARCA4-207ENST00000541122 DLGAP3O95886 979 aa15.58■□□□□ 0.09
SMARCA4-207ENST00000541122 ATP4AP20648 1035 aa15.58■□□□□ 0.09
SMARCA4-207ENST00000541122 AQP5P55064 265 aa15.58■□□□□ 0.09
SMARCA4-207ENST00000541122 DEPDC1Q5TB30 811 aa15.58■□□□□ 0.09
SMARCA4-207ENST00000541122 MROH9Q5TGP6 573 aa15.58■□□□□ 0.09
SMARCA4-207ENST00000541122 LPCAT2Q7L5N7 544 aa15.58■□□□□ 0.09
SMARCA4-207ENST00000541122 ELMO2Q96JJ3 720 aa15.58■□□□□ 0.09
SMARCA4-207ENST00000541122 NAT9Q9BTE0 207 aa15.58■□□□□ 0.09
SMARCA4-207ENST00000541122 AP5M1Q9H0R1 490 aa15.58■□□□□ 0.09
SMARCA4-207ENST00000541122 KPNA4O00629 521 aaPredicted RBP15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 VCPP55072 806 aaKnown RBP15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 ZFP1Q6P2D0 407 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 SLC26A11Q86WA9 606 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 CREG2Q8IUH2 290 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 ABI1Q8IZP0 508 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 TLR10Q9BXR5 811 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 PACSIN1Q9BY11 444 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 CSF1RP07333 972 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 AKR1B1P15121 316 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 GRB10Q13322 594 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 SUPT20HL1Q3ZLR7 823 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 TTMPQ5BVD1 217 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 TAGAPQ8N103 731 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 FBXO36Q8NEA4 188 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 TNIP3Q96KP6 325 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 NAALADL1Q9UQQ1 740 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 SNAP23O00161 211 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 C6orf10Q5SRN2 563 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 ZNF662Q6ZS27 426 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 IFNEQ86WN2 208 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 FAM162AQ96A26 154 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 CCDC126Q96EE4 140 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 SEMA4AQ9H3S1 761 aa15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 CORO1CQ9ULV4 474 aaPredicted RBP15.58■□□□□ 0.08
SMARCA4-207ENST00000541122 ARAP3Q8WWN8 1544 aa15.57■□□□□ 0.08
SMARCA4-207ENST00000541122 LMTK3Q96Q04 1460 aa15.57■□□□□ 0.08
SMARCA4-207ENST00000541122 CCDC78A2IDD5 438 aa15.57■□□□□ 0.08
SMARCA4-207ENST00000541122 NFIBO00712 420 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms