RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 C15orf41Q9Y2V0 281 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 L3MBTL1Q9Y468 752 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 COL11A1P12107 1806 aaPredicted RBP9.31□□□□□ -0.92
TCF4-207ENST00000540999 PARP14Q460N5 1801 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 ATP5BP06576 529 aaKnown RBP9.31□□□□□ -0.92
TCF4-207ENST00000540999 ATP1A3P13637 1013 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 IL10P22301 178 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 NEK3P51956 506 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 IFFO1Q0D2I5 559 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 SGCGQ13326 291 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 SEPT6Q14141 434 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 MORC3Q14149 939 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 MAPRE2Q15555 327 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 PTPN21Q16825 1174 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 CDONQ4KMG0 1287 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 KCNK18Q7Z418 384 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 TAB3Q8N5C8 712 aaPredicted RBP9.31□□□□□ -0.92
TCF4-207ENST00000540999 IL17RDQ8NFM7 739 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 LPAR1Q92633 364 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 LENG9Q96B70 501 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 GPATCH1Q9BRR8 931 aaKnown RBP9.31□□□□□ -0.92
TCF4-207ENST00000540999 NUF2Q9BZD4 464 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 TRIM5Q9C035 493 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 NEK6Q9HC98 313 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 SLC40A1Q9NP59 571 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 LRWD1Q9UFC0 647 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 GIMAP2Q9UG22 337 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 VANGL2Q9ULK5 521 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 RIPK3Q9Y572 518 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 RLFQ13129 1914 aa9.31□□□□□ -0.92
TCF4-207ENST00000540999 POTECB2RU33 542 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 SNPHO15079 494 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 ST8SIA5O15466 376 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 MTSS1O43312 755 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 PLA2G6O60733 806 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 LGR5O75473 907 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 HEXBP07686 556 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 HSPA6P17066 643 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 TARSP26639 723 aaKnown RBP9.3□□□□□ -0.92
TCF4-207ENST00000540999 HOXC12P31275 282 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 EPHX2P34913 555 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 MAP3K7CLP57077 242 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 CCNA1P78396 465 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 GRB10Q13322 594 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 AP3B2Q13367 1082 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 RFTN1Q14699 578 aaPredicted RBP9.3□□□□□ -0.92
TCF4-207ENST00000540999 KIF22Q14807 665 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 SUPT20HL1Q3ZLR7 823 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 C3orf62Q6ZUJ4 267 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 RFPL4BQ6ZWI9 263 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 RSRC2Q7L4I2 434 aaKnown RBP9.3□□□□□ -0.92
TCF4-207ENST00000540999 STRA8Q7Z7C7 330 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 SPATA24Q86W54 205 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 CLVS1Q8IUQ0 354 aaPredicted RBP9.3□□□□□ -0.92
TCF4-207ENST00000540999 ANKRD53Q8N9V6 530 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 ARL5BQ96KC2 179 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 NSMCE3Q96MG7 304 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 PNMA5Q96PV4 448 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 WDR18Q9BV38 432 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 SLC13A1Q9BZW2 595 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 NAT10Q9H0A0 1025 aaKnown RBP9.3□□□□□ -0.92
TCF4-207ENST00000540999 WASH6PQ9NQA3 447 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 GMIPQ9P107 970 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 SNX8Q9Y5X2 465 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 OTOFQ9HC10 1997 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 HOXC11O43248 304 aaPredicted RBP9.3□□□□□ -0.92
TCF4-207ENST00000540999 BUB1BO60566 1050 aaPredicted RBP9.3□□□□□ -0.92
TCF4-207ENST00000540999 ICAM1P05362 532 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 RETP07949 1114 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 CHRNB1P11230 501 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 SREBF1P36956 1147 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 HADHAP40939 763 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 ETV1P50549 477 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 FXR1P51114 621 aaKnown RBP eCLIP9.3□□□□□ -0.92
TCF4-207ENST00000540999 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
TCF4-207ENST00000540999 TMPRSS15P98073 1019 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 DSC3Q14574 896 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 SPCS2Q15005 226 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 DUS1LQ6P1R4 473 aaKnown RBP9.3□□□□□ -0.92
TCF4-207ENST00000540999 SARM1Q6SZW1 724 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 SCUBE1Q8IWY4 988 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 CCDC13Q8IYE1 715 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 CLEC4DQ8WXI8 215 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 OSBPL1AQ9BXW6 950 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 KLHL4Q9C0H6 718 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 SLC38A10Q9HBR0 1119 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.3□□□□□ -0.92
TCF4-207ENST00000540999 TEKT2Q9UIF3 430 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 PCDHA12Q9UN75 941 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 AFG3L2Q9Y4W6 797 aa9.3□□□□□ -0.92
TCF4-207ENST00000540999 DCAF8L1A6NGE4 600 aa9.29□□□□□ -0.92
TCF4-207ENST00000540999 SNTNA6NMZ2 147 aa9.29□□□□□ -0.92
TCF4-207ENST00000540999 GCOM1H8Y6P7 765 aaPredicted RBP9.29□□□□□ -0.92
TCF4-207ENST00000540999 CACNB4O00305 520 aaPredicted RBP9.29□□□□□ -0.92
TCF4-207ENST00000540999 PIK3CDO00329 1044 aa9.29□□□□□ -0.92
TCF4-207ENST00000540999 GUCY1B2O75343 617 aa9.29□□□□□ -0.92
TCF4-207ENST00000540999 POLR2MP0CAP2 368 aa9.29□□□□□ -0.92
TCF4-207ENST00000540999 POU2F1P14859 743 aa9.29□□□□□ -0.92
TCF4-207ENST00000540999 GBP1P32455 592 aa9.29□□□□□ -0.92
TCF4-207ENST00000540999 TRIM23P36406 574 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms