RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 HAPLN1P10915 354 aaPredicted RBP22.55■■□□□ 1.2
CHFR-217ENST00000540537 PSMC3P17980 439 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 ATF6P18850 670 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 AFMP43652 599 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 GRM2Q14416 872 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 BMT2Q1RMZ1 405 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 VITQ6UXI7 678 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 GAREM2Q75VX8 874 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 CEP57L1Q8IYX8 460 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 TOP6BLQ8N6T0 577 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 LPIN3Q9BQK8 851 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 ACBD6Q9BR61 282 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 BRD9Q9H8M2 597 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 LTB4R2Q9NPC1 389 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 COL4A3Q01955 1670 aa22.55■■□□□ 1.2
CHFR-217ENST00000540537 CACNA1IQ9P0X4 2223 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 GFRA3O60609 400 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 SLFN14P0C7P3 912 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 GLULP15104 373 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 VIPR2P41587 438 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 MYL7Q01449 175 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 CUL4BQ13620 913 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 NFE2Q16621 373 aaPredicted RBP22.54■■□□□ 1.2
CHFR-217ENST00000540537 DUOXA2Q1HG44 320 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 LMBRD2Q68DH5 695 aaPredicted RBP22.54■■□□□ 1.2
CHFR-217ENST00000540537 SCARA3Q6AZY7 606 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 TPRG1Q6ZUI0 275 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 HS2ST1Q7LGA3 356 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 WDR49Q8IV35 697 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 MFSD6LQ8IWD5 586 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 OR5B17Q8NGF7 314 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 FAM200AQ8TCP9 573 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 LEO1Q8WVC0 666 aaPredicted RBP22.54■■□□□ 1.2
CHFR-217ENST00000540537 IRF7Q92985 503 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 TRPV5Q9NQA5 729 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 HEBP1Q9NRV9 189 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 ABI2Q9NYB9 513 aaPredicted RBP22.54■■□□□ 1.2
CHFR-217ENST00000540537 CGNQ9P2M7 1197 aaKnown RBP22.54■■□□□ 1.2
CHFR-217ENST00000540537 R3HCC1Q9Y3T6 440 aaKnown RBP22.54■■□□□ 1.2
CHFR-217ENST00000540537 PCDHB5Q9Y5E4 795 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 SNX9Q9Y5X1 595 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 PTPRJQ12913 1337 aa22.54■■□□□ 1.2
CHFR-217ENST00000540537 GABRR2P28476 465 aa22.53■■□□□ 1.2
CHFR-217ENST00000540537 MAGEA9P43362 315 aa22.53■■□□□ 1.2
CHFR-217ENST00000540537 MYO1EQ12965 1108 aa22.53■■□□□ 1.2
CHFR-217ENST00000540537 UBXN2BQ14CS0 331 aa22.53■■□□□ 1.2
CHFR-217ENST00000540537 SNRNP35Q16560 246 aaKnown RBP22.53■■□□□ 1.2
CHFR-217ENST00000540537 ARHGAP15Q53QZ3 475 aa22.53■■□□□ 1.2
CHFR-217ENST00000540537 NELFCDQ8IXH7 590 aa22.53■■□□□ 1.2
CHFR-217ENST00000540537 MKNK1Q9BUB5 465 aa22.53■■□□□ 1.2
CHFR-217ENST00000540537 ATXN3LQ9H3M9 355 aa22.53■■□□□ 1.2
CHFR-217ENST00000540537 SLC39A2Q9NP94 309 aa22.53■■□□□ 1.2
CHFR-217ENST00000540537 TMLHEQ9NVH6 421 aa22.53■■□□□ 1.2
CHFR-217ENST00000540537 DDX43Q9NXZ2 648 aaKnown RBP22.53■■□□□ 1.2
CHFR-217ENST00000540537 SERTAD1Q9UHV2 236 aa22.53■■□□□ 1.2
CHFR-217ENST00000540537 NUP210Q8TEM1 1887 aaPredicted RBP22.53■■□□□ 1.2
CHFR-217ENST00000540537 RIF1Q5UIP0 2472 aaKnown RBP22.52■■□□□ 1.2
CHFR-217ENST00000540537 COL4A2P08572 1712 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 FAM170BA6NMN3 283 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 HEPACAM2A8MVW5 462 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 ACTN4O43707 911 aaKnown RBP22.52■■□□□ 1.2
CHFR-217ENST00000540537 LRRN2O75325 713 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 CMA1P23946 247 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 CDC25CP30307 473 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 GDI1P31150 447 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 LHX1P48742 406 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 CDR1P51861 262 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 INTS6LQ5JSJ4 861 aaKnown RBP22.52■■□□□ 1.2
CHFR-217ENST00000540537 STXBP5Q5T5C0 1151 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 ZNF852Q6ZMS4 543 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 DPH6Q7L8W6 267 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 FRMD5Q7Z6J6 570 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 C1orf210Q8IVY1 113 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 C12orf56Q8IXR9 622 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 GRAMD1CQ8IYS0 662 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 ADGRF2Q8IZF7 708 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 XXYLT1Q8NBI6 393 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 GCNAQ96QF7 691 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 NELL2Q99435 816 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 BCO2Q9BYV7 579 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 ABCB6Q9NP58 842 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 MRPS17Q9Y2R5 130 aaKnown RBP22.52■■□□□ 1.2
CHFR-217ENST00000540537 ZDHHC9Q9Y397 364 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 MTF2Q9Y483 593 aaPredicted RBP22.52■■□□□ 1.2
CHFR-217ENST00000540537 DMDP11532 3685 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 NCANO14594 1321 aa22.52■■□□□ 1.2
CHFR-217ENST00000540537 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.51■■□□□ 1.19
CHFR-217ENST00000540537 GABRDO14764 452 aa22.51■■□□□ 1.19
CHFR-217ENST00000540537 CLIC2O15247 247 aa22.51■■□□□ 1.19
CHFR-217ENST00000540537 CD72P21854 359 aa22.51■■□□□ 1.19
CHFR-217ENST00000540537 WEE1P30291 646 aa22.51■■□□□ 1.19
CHFR-217ENST00000540537 KRT85P78386 507 aa22.51■■□□□ 1.19
CHFR-217ENST00000540537 PSMD6Q15008 389 aa22.51■■□□□ 1.19
CHFR-217ENST00000540537 TAF12Q16514 161 aa22.51■■□□□ 1.19
CHFR-217ENST00000540537 KNOP1Q1ED39 458 aaKnown RBP22.51■■□□□ 1.19
CHFR-217ENST00000540537 LIMS2Q7Z4I7 341 aa22.51■■□□□ 1.19
CHFR-217ENST00000540537 OSTM1Q86WC4 334 aa22.51■■□□□ 1.19
CHFR-217ENST00000540537 GIPC2Q8TF65 315 aa22.51■■□□□ 1.19
CHFR-217ENST00000540537 HPDLQ96IR7 371 aa22.51■■□□□ 1.19
CHFR-217ENST00000540537 SPATA32Q96LK8 384 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms